KEGG   Trematomus bernacchii (emerald rockcod): 117496376
Entry
117496376         CDS       T09643                                 
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
  KO
K06246  laminin, gamma 2
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04382  Cornified envelope formation
tben04510  Focal adhesion
tben04512  ECM-receptor interaction
tben04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117496376 (lamc2)
   04518 Integrin signaling
    117496376 (lamc2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117496376 (lamc2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    117496376 (lamc2)
SSDB
Motif
Pfam: Laminin_B EGF_laminin EGF_LMN_ATRN EGF_Teneurin Zn_ribbon_11 Adhesin_P1_N Fib_alpha
Other DBs
NCBI-GeneID: 117496376
NCBI-ProteinID: XP_034003916
LinkDB
Position
Unknown
AA seq 1125 aa
MRTSWISVCGLLAAVCAVQATHTFYSTVRCDCNGRSRYCLRDAGGLHCVDCQGHFEGRHC
ERCKDGFHQQGALPSCTPCRCNPTGAVSTTCDSRGRCSCKDGVTGDKCDRCPDGPIGATG
CKQSRQPRQDSGNCFCYGHSSRCSAKSGYSVHNITSTFASGPDGWRAATARGDTPPDVHF
RWSPKHQDLEVISKNSLPVYLYAPARYLGNRLLSYGQNFSFSLRLDRGVRHPSVSDVILE
GNGLKVTASLGELRSIVPCGQKVHYSFRLDEQPSSRWRPQISSAQFHSLLQNLTAIKIRV
TFGENGRGYLNNVRLVSAHRGAGPPAGWVQTCSCPTGYDGDFCDGCSAGFRRSAPADGAF
SPCEPCSCRGGSCDPLTGDCYSGDQSSGDCSAGSYRDPWPPRACLKCPCPEGRSCSLAAG
SLDPRCDRCPAGTTGDDCNVCQEGFYGGAARGDGVSTQTCRPCQCNGHIDVSVVGSCHRG
SGECLKCVNNTNGPSCESCLRGFYHSRAADACKACDCSVLGSESGQCDDSGRCRCRPGFE
GLKCQRSNCPACFTPIKRKMQAYAAKLAELERLFSEMDAGLKPANKAEMEAALNAVEELV
DDLQYETEGLTVAEKKLQARLASISRSQLDEEQEIQNVVDAADDIKQQERTYSAKVKEVQ
ALMEDMKRKLDKAKADLRSADIPQGDAPLGTTLLSSLVPTALSLADKHQTTADSVERTAS
EALTDSKKSLALVRDLMTRENKVQELIGDMKAMHDKTSAQVKSLENQGVRLSDQAKDESK
TSDGMLKDIANMERSIPADLKGQVDAMVSRLDDVKVEVDAHISDLDALQDTVQRDKTATE
DLLAQGKDATKEFNKLVDRVDVAKVQTEDALKRINSNTNELEDALNALRGFDQQIDDSKS
LADDAIKRLPGINATIQQAVSNNDETSGILGDVSAEYDSSVKTINLLGNLVTGLENTFGS
LPPHTGLLNQATKLNKDSKDLKQRTLDATDNLTSELEDGRTLEGEAEQAADGATAALNNA
RNTRDDVGKTLRDINALLAKMDQSTPVDETQLRALEVALDGAQQEVQGRLRPRLRDMEAG
EEAYRRRLSGINRDIGSILKDIINLEDILAAVPSGCYNSPPIEEA
NT seq 3378 nt   +upstreamnt  +downstreamnt
atgaggaccagctggatctcagtgtgtggactactggctgcagtgtgtgccgtgcaggcc
acacacacattttactcgacggtgcgctgcgactgtaatggccgctccaggtactgcctg
cgagacgccggggggctgcactgcgtcgactgccagggacattttgagggtcgccactgc
gagcgctgcaaggacggcttccaccagcagggggcgctgccgagctgcacgccctgccgc
tgcaaccccacaggtgctgtcagtaccacgtgtgacagcagggggcgctgcagctgcaaa
gacggcgtcacaggagacaaatgtgaccgctgcccagacggaccaatcggagccaccggc
tgcaagcagagccgtcagcccagacaggattctgggaattgtttctgttacggtcacagt
agccgctgctctgcaaagtccggatactccgtccacaacatcacctccaccttcgccagc
ggtccggacggttggagagcagcgacggctcgaggcgacacgccccccgacgttcacttc
cgctggtctcctaaacaccaggacctggaggtgatctccaagaacagcctgccggtctac
ctgtacgctccagctcgttacctggggaaccggctgctgagttacggtcagaacttctcc
ttctcgttgcgtctggaccgaggcgtccgtcacccgtccgtcagcgatgtgattctggag
ggaaacggcctcaaagtgacggcttctctgggagagctgaggtccatcgtgccctgcgga
cagaaggtccactacagcttcagactggacgagcagcccagcagccgctggaggcctcag
atctcctccgctcagttccactcgctcctccagaacctcaccgccatcaagatcagggtc
acgttcggagagaatgggcgcggctacctgaacaacgtgcgcctggtatcagctcatcgg
ggtgctggtccccctgctggctgggtccagacctgcagctgcccgaccgggtacgacggg
gacttctgcgatggatgctcggcggggttcagacgcagcgcccccgcagacggagccttc
agcccctgtgagccctgcagctgccggggggggagctgcgacccgctgaccggggactgc
tactccggggaccagtcgtccggagactgctccgccgggtcctaccgagacccgtggccc
ccaagagcctgcctgaagtgcccctgtccggagggaaggtcctgctcgctggctgctggg
tctctggatccccgctgtgaccgctgccctgcaggaaccacaggtgatgactgtaacgtc
tgtcaggaggggttttacggcggcgctgctcggggtgacggcgtgtcgacgcagacctgc
agaccctgccagtgtaacggacacatcgacgtcagtgtggtggggagctgccatcgaggc
agcggagagtgtctgaagtgtgtgaacaacaccaatggtcccagctgcgagtcctgtctg
cgagggttctaccacagccgggccgccgacgcctgcaaggcgtgtgactgcagtgttctg
ggctctgagtccggacagtgtgatgattcgggtcgctgccggtgccggccaggcttcgag
ggtctgaagtgccagaggtccaactgccccgcctgtttcacccccatcaagagaaagatg
caggcctacgctgccaagctggccgagctggagcgtctgttctcagagatggacgcaggt
ttgaaacccgccaacaaggcagagatggaggcggctctgaacgctgtggaggagctggtg
gacgacctgcagtacgagaccgaggggctcacagtggcggagaagaagctgcaggcgcgt
ctggcgtccatcagcaggagtcagctggacgaggagcaggagatccaaaacgtggtcgac
gcagcggacgacatcaaacaacaagagcggacgtacagcgccaaggtgaaggaggtccag
gctctgatggaggacatgaagagaaaactggacaaagccaaggccgacctcagatcagcc
gacatccctcagggagacgctcctctggggacgaccctcctctcctctctggtgcccacg
gccctcagtctggctgataaacaccagacgacggctgactctgtggagcggaccgccagc
gaagctctgacagactccaagaagagtctggctctggtccgggacctcatgaccagagag
aacaaagtccaagagctgatcggagacatgaaggccatgcacgataagacctcggcccag
gtgaagagtttggagaaccagggggtccgtctgagcgaccaggccaaagacgagagcaaa
acgtccgacggcatgttgaaggacatcgccaacatggagcgaagcatcccagcagacctg
aaggggcaggtggacgccatggtgtcccgtttggacgatgtgaaggtggaggtggacgca
catatctcagatttggatgcgctgcaggacaccgttcagcgagacaagaccgccaccgag
gacctgctggcccagggcaaggacgccacgaaggagttcaacaagctggtggacagagtg
gatgtcgccaaggtgcagacggaggacgctctgaaacgcatcaacagcaacaccaacgag
ctggaggacgccctgaatgcgctgagaggcttcgaccagcagatcgacgacagcaagtct
ctggccgacgacgccatcaaacgtcttcctggcatcaacgccaccatccagcaggcggtc
agcaacaacgatgagaccagcggcatcctgggagacgtgtctgcagagtacgacagctcc
gtgaagaccatcaacctgctggggaacctggtcaccgggctggagaacacctttgggtcc
ctgccgcctcacaccggtctgctgaaccaagccaccaaactgaacaaagactctaaggat
ctgaagcagcgaaccctcgatgcaacagataacctgacctcagagctggaggacggccgg
acgctggagggcgaggccgagcaggcagctgatggggcgactgcagctctgaacaacgcc
agaaacaccagagacgacgtggggaaaactctgagagacatcaacgccctgctggccaag
atggaccagtccactcctgtggacgagacccagcttcgggctctggaggtggctctggac
ggggctcaacaggaggtgcagggccgcctgaggccccgtctgagggacatggaggccgga
gaggaggcgtaccgccggagactctctggcatcaacagggacatcggctccatcctgaag
gacatcatcaacctggaggacatcctggcagccgtgccctccggctgctacaacagcccc
cccatcgaggaggcctga

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