KEGG   Trematomus bernacchii (emerald rockcod): 117496406
Entry
117496406         CDS       T09643                                 
Symbol
chmp4c
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04144  Endocytosis
tben04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:tben00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117496406 (chmp4c)
  09143 Cell growth and death
   04217 Necroptosis
    117496406 (chmp4c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tben04131]
    117496406 (chmp4c)
   03400 DNA repair and recombination proteins [BR:tben03400]
    117496406 (chmp4c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117496406 (chmp4c)
Membrane trafficking [BR:tben04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    117496406 (chmp4c)
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    117496406 (chmp4c)
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117496406 (chmp4c)
  Exosomal proteins of colorectal cancer cells
   117496406 (chmp4c)
SSDB
Motif
Pfam: Snf7 DUF155 Phage_TAC_15 DUF3573 DUF6437
Other DBs
NCBI-GeneID: 117496406
NCBI-ProteinID: XP_034003957
LinkDB
Position
Unknown
AA seq 233 aa
MSKIAKLFKGSSSSGSSSSSKSKHSRSRGGPSPQEAIHKLRETEEMLTKKQDYLEKRIEQ
ELTIAKKNGTKNKRAALQALKRKKRLEQQLTQIDGTLSTIEFQREALENSHTNTEVLKNM
GFAAKAMKQVHENMDIDKIDDLMQDITEQQDVAREISDAISGPFGETFDEDELLAELEEL
EQEELEENMKRMGGLPSVPSSKLPSARPSSHRATTKKRVEDEDDMRTLASWAT
NT seq 702 nt   +upstreamnt  +downstreamnt
atgagtaaaatcgcgaagttattcaaagggagctccagctccggatcttccagctcctcg
aagtccaaacacagccggtccagaggaggcccttccccgcaggaggccatccacaaactg
cgggagaccgaggaaatgctgaccaagaaacaggactacctggagaagaggatcgagcag
gagctgacgatagccaagaagaacggcaccaaaaacaagagagccgccctgcaggcgctg
aagaggaagaagcgtctggagcagcagctgacgcagatcgacggcactttgtccaccatc
gagtttcagagagaggctctggagaactctcacaccaacacggaggtcctgaagaacatg
ggcttcgctgccaaggccatgaagcaggtccacgagaacatggacattgataagatagac
gatctgatgcaggacatcacggagcagcaggacgtcgctcgagaaatcagcgacgccatc
tccggaccttttggagagacgtttgacgaggacgagctgctggctgagctggaggagctg
gagcaggaggagctggaggagaacatgaagaggatgggaggattacccagcgtgccgagc
agcaaactgccctcagcgagacccagcagtcacagagcgaccactaagaagagagttgag
gacgaggacgacatgcggacgctggcatcgtgggcgacttaa

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