Trematomus bernacchii (emerald rockcod): 117496507
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Entry
117496507 CDS
T09643
Symbol
rad51c
Name
(RefSeq) DNA repair protein RAD51 homolog 3 isoform X1
KO
K10870
RAD51-like protein 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03440
Homologous recombination
tben03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117496507 (rad51c)
03460 Fanconi anemia pathway
117496507 (rad51c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117496507 (rad51c)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
117496507 (rad51c)
FA (Fanconi anemia) pathway
Other FA pathway factors
117496507 (rad51c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
AAA_25
ATPase
RecA
TrwB_AAD_bind
AAA_24
AAA_22
AAA_18
Motif
Other DBs
NCBI-GeneID:
117496507
NCBI-ProteinID:
XP_034004077
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MLGNASGEEQMKMQISSCSLSPAVKSRLTAAGFHFLSELRGLSPSHICAEAGVSQQEALQ
VLQAVRGGASMRGGASGGGASGGGAVGGGASVGGASVGPPPSLTALQLLQEEQSQRSIFS
FCSQLDATLGGGLPVGKTTEICGAPGTGKTQLCLQLVVDVQVPVCFGGLEGQVVVVDTEG
SFLLQRVQDIAGAVVKHCSLLVEDDEQRVAMTTFSVETILSNIFLVRCHDYVELLAELHL
LPDFLSEHPRARLLVIDSVAFPFRLHFDELSQRTRLLNGLAQQLIAMATSHNVAVVITNQ
MTTRLRGGQSQLVPALGESWGHAPTIRLLLQWAGTQRLATIFKSPGHPGATVQYQITSDG
FRDADQSEQPPSKRPRTHTVQSAARQRDSNQSSAGQRDSNQSAAGQRDSNQSAAGQRDSN
QSAAGQRDSNQSAAGQRECS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaaacgcgagcggtgaagagcagatgaagatgcagatctccagctgttctctc
agtccagctgtgaagagccgactgacagcagctgggttccacttcctgtctgagctgcgg
gggctaagcccctcccacatctgtgcagaggccggagtctcccagcaggaggcgctgcag
gtgctgcaggcagtgaggggaggagcttcaatgaggggaggcgcttcagggggaggtgct
tcagggggaggagcagtgggaggaggagcttcagtgggaggagcttcagtgggacctccc
ccctccctcactgcgctgcagctgcttcaggaggaacagtcacagcgcagcatcttcagc
ttctgctcacagctggacgccacgctgggggggggacttcctgtcgggaagaccaccgag
atctgtggagcgccgggaaccgggaagacacaactgtgtctgcagctggtggtggacgtg
caggttcccgtgtgtttcgggggtctcgaaggccaggtggttgtcgtggatacggagggc
agcttcctgttgcagcgggtccaggatattgccggcgccgtggtgaaacactgctcctta
ttggtggaagacgacgaacagcgggttgctatgacgaccttcagcgtggaaaccatcctt
tctaacatcttcctggtgcgttgccatgactacgtggagctgctggccgagctgcacctg
ctgccggacttcctgtcggagcacccgagggcccgcctcctggtgattgacagcgtggcg
ttcccgttccggctgcactttgacgagctgtcgcagaggacccgcctcctcaacggcctc
gcccagcagctcatcgccatggcaaccagccacaacgtcgccgtggtgatcaccaatcag
atgacaaccaggctgcggggcggccaatcacagctcgtccccgccctcggggagagctgg
ggccacgcccccaccatcagactcctcctacaatgggcggggactcaacgactagccacc
atctttaaatcccctggtcaccccggagccaccgtccaataccagatcacctccgacggg
ttcagagatgccgaccaatcagagcagccgcccagcaaacgaccccgaacacacactgtc
caatcagctgccagacagagagacagtaaccaatcttctgccggacagagagacagtaac
caatcagctgccggacagagagacagtaaccaatcagctgccggacagagagacagtaac
caatcagctgccggacagagagacagtaaccaatcagctgccggacagagagagtgcagc
tga
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