Trematomus bernacchii (emerald rockcod): 117496555
Help
Entry
117496555 CDS
T09643
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117496555
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117496555
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117496555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
Trypan_PARP
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
Prok-RING_4
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
117496555
NCBI-ProteinID:
XP_034004148
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
ESGVDPVEPPENSEDPANGDSLLDWLNTVRRTGNTTRTGHRGNQSWRAVSQTNPNSGDFR
FSLEISVNRNLAEQQAAAEGEQESPHESPQETPQATSEETPESQEMVANVEPLVVEAEPQ
VPMETDVVEEPVVEEVAVIVEPEPELEPELDPEPELEPELEQEPELEQEPELEQEPEQEP
EPEPEPEQEPEPEPEPELEEVVSQEILGEPLLSTAALLVQPPQPPLSPSPRRGQRRARSR
SPEPRRTRARTARSRSPLNLDRLDGLPNPRHAHSTQGLNPATNAPPVLQVEGSSRTRQHV
LSRQSTADVDVQPSRASAEVVPEAQPVGAQEGEAAAGEGAAAGRRPPTIMLDLQVRRVRP
GEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRIS
DAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGATTPADLAEALNNPEANP
AAAPVADVEEPPVAAGVRARTAETDTEEGVVTAPPASAGRVRPLPPISLAEPSSLPFLRL
AHFFLLNDDDEDQPQGLTIEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHE
YHVHCIDRWLSENSTCPICRSAVLVSANRESVV
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gaaagtggagtggatccagttgaaccaccagaaaactctgaggatcctgcaaatggggat
agtctcttagactggctgaacacagtgaggcgcacaggcaacacaaccagaactggtcat
cgtggaaaccagtcatggcgggccgtgagccagaccaacccaaacagtggtgatttccgc
ttcagcctggaaatcagtgtgaaccgcaacctggctgaacagcaggcagctgctgaaggg
gagcaggaatctccacacgaatctccacaggaaactccgcaggcaacttcagaagaaacc
ccagagagtcaagaaatggtggctaatgttgaaccacttgtggtggaggctgaaccacag
gtacccatggagacggacgtggtggaagaaccggttgtagaggaagtggctgtgatagtc
gagccagagccagagctggagccagagctggatccggagccggagctggagccagagctg
gagcaggaaccagagctggagcaggaaccagagctggagcaggaaccagagcaggaacct
gaacctgaacctgaaccagagcaggaaccagaacctgaaccagagcctgaactagaagaa
gttgtttcacaagagattttaggagaacctctcctctcaactgccgccctgctggtacaa
ccaccacaacccccactctctccttctccacgcagaggacagcggagagcccgcagccgt
agtccagaaccacgcaggaccagggcgcgcacggccaggagccgctcccctctcaacctg
gatcgcctggatggcctcccgaatccacgtcatgctcacagcactcaaggcctcaaccct
gccaccaatgctccccctgtgcttcaagtggagggcagttcacggactcgacaacacgtt
ctttctaggcaaagcactgctgacgttgatgttcagccatctagggctagtgcagaagtg
gtcccagaggcccaacctgtaggagctcaggaaggagaagctgctgcaggggaaggggcc
gcagcagggcgccgtccccctaccattatgcttgatctccaggtgcgtcgtgtgcgtcca
ggcgaatatcggcaaagagacagcattgctagccgcacccgttcacgctcccagaactca
aacaacacatttctttatgagagtgagcgtggtggatttcgcaggactttctcacgctct
gagcgtgctggggtgaggacctacgtcagcactattcgcatccctatccgaagaatctct
gatgcaggtttgggggaagccacctcgatggctctccaatctatgattaggcaaataatg
actggttttggtgaactcggctacctcatggactcagactccgattcgtcagattcaaac
cgtggagccaccacacctgcagatctggctgaagccctcaacaacccggaagccaatcct
gctgcggctcctgttgctgatgtggaagaaccccctgtagctgcaggagtcagagcaagg
acagctgagactgatactgaggagggtgttgtcactgctccccctgcctcagctggcagg
gttagaccactaccacctatcagcctagcggagcccagctcattgcctttcttgcggctt
gctcacttctttcttctaaatgatgacgatgaggaccagccccaagggctgaccatagag
cagattgacaacctctcaatgcgcaattttggtgagagtgatgccctgaagacttgcagt
gtctgcataacagaatatgcagaaggtaacaagctacgtaagttgccctgctctcatgag
taccatgtgcactgcattgatcgctggctatccgaaaactccacttgccccatctgccgc
agtgctgtcttggtgtcagccaacagagagagtgttgtgtag
DBGET
integrated database retrieval system
