Trematomus bernacchii (emerald rockcod): 117496678
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Entry
117496678 CDS
T09643
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04217
Necroptosis
tben04622
RIG-I-like receptor signaling pathway
tben04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117496678 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117496678 (cylda)
04625 C-type lectin receptor signaling pathway
117496678 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117496678 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117496678 (cylda)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117496678 (cylda)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C67
117496678 (cylda)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117496678 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
117496678
NCBI-ProteinID:
XP_034004289
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVIKECTVEKTPQKTLRIPRGSLGQACQERNSLGRTLP
PNKGKKSLRILDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKSRLERVRD
IDCGSKVRVQLRLGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDDDDEALGELEVDHVNLVEDDQDFPPLEINSRVLVQTR
DGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGMIDGKLLCNFASLEHTRLVPICD
VMPDYSMQDQRLQKHSFAPRGTNSEKSSSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSSV
DPPAQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSPPPSRAPPSATLSTDNKFHSLPFSL
NRKTGPIDSMSHGPLSLSVQSVMGEQPEPPSPAAPPSPRPSTPPRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCR
PDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNS
CYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVM
KLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLRLRSAGQKVQDCYFYQIFMD
KKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDL
LEDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKTHRHGKLSV
PKELQEGSGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSSWLFFDSMADRDGGQNG
FNIPQVSPCPEVEAYLKMSPEELHSLDPKSIVGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgccctgtggagccaggagaagcccagcgggggcttcagggaggactggcgc
ttctacatggtcatcaaggagtgtacggtggagaagaccccccagaagaccctgaggatc
ccccgcggcagcctcggtcaggcctgccaggagcgcaacagcctggggagaacgctgcct
ccaaacaagggcaagaaaagtctccgcatcctggaccagaccaacgtggtgctgagtctg
gacgagcgggacgtcctggagctggacgagaagctggcagagctgctgttccccatcaca
aactgcgaggagcgctacgccctgctctgcaacaagtcccggctggagcgagtgcgtgat
attgactgtgggtcgaaggtgagggtccagctgcgcttgggggacgaacctctgcccggg
gtggtccgcttcaaaggctcactgctgcctgacagagcgctctctggaatctggttcgga
gtagagctgctggaggagggccggggccagggcttcaccgagggatcctaccagggacgc
caactcttccgctgtgaggatgagtgcggtgtgtttgtggccctggacaagcttgaactc
tgggaggatgacgatgacgaagctttgggtgagctggaggtggaccacgtgaatctggtg
gaagacgaccaggactttcctcctctggagatcaactccagggtcctggtgcagaccagg
gacgggccggagagagggaccatcatcttctgtgacctgctgcccgggaatgagagcctg
ggctactatgtgggagtagacatggacaatcccatcggggactgggatggtatgatcgat
gggaagctgctgtgtaattttgccagtttggagcacactcgactcgtacccatctgtgac
gtaatgccagattattccatgcaggaccaaaggctgcaaaagcacagttttgcccccaga
ggcaccaacagtgaaaagtcgtcctctggccaaagcaaaccaaagagcaaaggattaggt
catcagtgtggcagtagaagcaagtctgagttttactatactttaaatggcagctctgtt
gaccctcccgcccagtccaaatccaaaagcacatggtacattgatgaagttggggaggac
cccgccaagtcgctcactgacacaccccccgacttcaaccagtcccccccgccctcccga
gccccaccctccgccacgctgtccactgacaacaagttccactcgctccccttcagcctg
aaccgtaagacgggccccatcgacagcatgagccacggccccctgtcgctgtccgtgcag
tcggtgatgggggagcagcccgagcccccgtcacccgccgcccccccgtcaccgaggcct
tcgacgcccccccgaggacagcccggtctggaggtgggctctctggtggaggtgaaggag
aacccccctctgtgtggggtcatccgctgggtgggcctcccccccggcctgctggagccg
ctcgctgggctggagctggaggaggagtgtcctggttgcactgacggcacgttcaaaggt
acgcggtacttcacctgccctcccaaaaaagctctgtttgtgaagctcaagtgctgccgg
cccgactcccgcttcccgtccttgcaccactcctccaaccccatcgagcgctgcaactcc
atcgcatttggggggtacctcagcgaagtagtgcatgagaacacgcctccacgcacagag
aacgacggtctggatgtcatggtgggaaaaaagaaaggcatccagggccactacaactcc
tgctacctggattcaacactcttctgtctgttctccttcagctctgttctggacacggtt
ctcctgaggccgcgatctaaaaccgatgtggaatattaccgagagacacaagagctgctg
cgcacagagatagtcaacccgctgcgcatacatgggtatgtttgtgccacaaaggtgatg
aagctgaggaggatcctggagaaagtagaagctgcttctgggtttacgtctgaagaaaaa
gatcctgaggagttcctcaatatccttttccatcacatactgagggtggacccgctgctc
aggctaaggtcagcggggcagaaggtgcaggactgttacttctatcagatctttatggac
aagaaggacaaagtgggagttcccacaatccagcagctgctcgagtggtccttcatcaac
agcgacctcaagtttgcagaggctccctcctgccttatcatccagatgcctcgctttggc
aaagacttcaaaatgttcaacaagattttcccctctctagagttagacatcacagacctt
cttgaagacactccgagggaatgtcgaatctgcggaggcctggctctgtacgagtgtcga
gactgttatgaggacggggacatcacggcgggaaagattaaacagttctgtgaaaagtgc
aatacgcaggtccatctccacccgaggaggaaaacccaccggcacgggaagctgtccgtc
cccaaggagctgcaggagggctcggggcggcagggctcgttcccccgccagaggatggag
ctgttcgccgtgctgtgcatcgagaccagtcactacgtggccttcgtcaagtacggcagc
gcggactcctcctggctcttcttcgacagcatggcggaccgcgacggagggcagaacggc
ttcaacatcccgcaggtgtccccctgccccgaggtggaggcgtacctgaagatgagcccc
gaggagctgcactccctggaccccaagagcatcgtgggccaggcccgccgcctgctctgc
gacgcctacatgtgcatgtaccagagccccaccatgagcctgtacaagtag
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integrated database retrieval system
