KEGG   Trematomus bernacchii (emerald rockcod): 117496679
Entry
117496679         CDS       T09643                                 
Symbol
lsm14ab
Name
(RefSeq) LOW QUALITY PROTEIN: LSM14A mRNA processing body assembly factor b
  KO
K18749  protein LSM14
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tben03019]
    117496679 (lsm14ab)
Messenger RNA biogenesis [BR:tben03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117496679 (lsm14ab)
SSDB
Motif
Pfam: LSM14 SM-ATX FDF New_glue UBR4 DUF4404
Other DBs
NCBI-GeneID: 117496679
NCBI-ProteinID: XP_034004294
LinkDB
Position
Unknown
AA seq 460 aa
MSGGGTPYIGSKISLISKAGIRYEGILYTIDTENSTVALAKVRSFAMRTRPTDRPIPPRD
EVFEYIIFRGSDIKDLTVCEPPKATSSLPQDPAIVQSSLGSANVAPPPSFQAPGPYVPLS
KAPPAPYSQFGVAPLASQTFGSAGGRASPELDSLKKRPILEQAVQPPPLLPPPPPAPVGQ
RPQPTAAPRPHQQQRRHPEAPDLLEQRRLLRFRRCLSPEHEHGAMENRDPNKRYNAGLQS
NRRGRGRGNRSRGRVNVRRDGAMKFEEDFDFETANAQFNKDEIDKELQNKLKLKDDKIEK
SLNGEEAAESAEHPASEGTTTTAASTTTTTTTTTNEDDEATSNTYYDKTKSFFDNLGADD
LSKGGDRGFSRRRRTEENWAEERRMNSETFGIPLRHNRGRGGSAGEASWGPPRRRGRPLS
RGSFAAPERTPPRFRGAFRGGRGGRDFSDFEYRKDNKVAA
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgagcggaggaggaacgccgtacattgggagcaaaattagcttaatctccaaggccggg
atccgctatgaaggaattttgtacaccattgatacggagaactcgaccgtagctcttgct
aaagtgcgctcttttgcaatgaggacccggcccactgacaggcctattcctcctcgggat
gaagtgtttgagtacatcatcttcagagggagtgacataaaggacctgacagtctgtgag
ccgcccaaagccactagctccctgcctcaggaccctgctatcgttcaatcgtcgcttgga
tccgccaatgttgccccgccgccctccttccaggccccggggccctacgttccgctcagc
aaggcccctcctgccccctatagccagtttggagtcgcccccctagcatctcagacgttt
ggatctgctggaggacgcgccagtcccgaactggactcgttgaaaaaacgtcccattctg
gagcaggccgtgcagcccccccctcttctgcccccgcccccccctgctcctgtgggtcag
aggcctcaacccactgcggccccccgaccccaccagcagcagcgcaggcatccagaagcc
ccagacctcctggagcagagacgcctcctgaggttcagacggtgtctcagccctgagcat
gaacacggtgcgatggagaaccgagacccaaacaagcgctacaatgctggtctgcagtct
aaccgacgtgggcgcggcagagggaaccgcagcagaggccgagtgaacgtacgtcgggac
ggtgccatgaagtttgaagaagacttcgactttgagaccgccaacgctcagttcaacaag
gatgagatcgacaaagagctgcagaacaaactcaaactgaaagatgacaagattgagaag
tctctgaacggagaggaagctgcagagtcagcagaacatccggccagcgagggcaccacc
accaccgccgccagcaccaccaccaccaccaccaccacaaccaacgaagatgacgaggct
acgtccaacacttactacgacaagaccaagtccttcttcgataacctgggtgctgacgat
ttaagtaaagggggcgatcgaggcttctcaagaagaagacgaacggaggaaaactgggcg
gaggagcgacggatgaactctgagacgttcggcatccctctgaggcacaaccgaggacga
ggtggttccgcgggcgaggcttcatgggggcccccgcggcgcagagggcggcccctcagc
cgaggctccttcgcggcccccgagaggacccccccgcgcttcagaggcgcgttcaggggt
ggcagaggaggccgggatttctctgacttcgaatacaggaaggacaacaaagtggctgcg
tag

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