Trematomus bernacchii (emerald rockcod): 117496715
Help
Entry
117496715 CDS
T09643
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117496715 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
LRR_14
PDZ_6
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
117496715
NCBI-ProteinID:
XP_034004346
LinkDB
All DBs
Position
Unknown
AA seq
1838 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQTVPDEVFRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCRALEIADFSGNPLTRL
PDGFTQLRTLAHLALNDVSLQTLPNDIGNLANLVTLELRDNQLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPSELN
GLLALTDLLLTQNQLEDVPDSIGCLKQLSIFKVDQNRLTQLTDSIGECENLTELVLTENL
LESLPRSLGKLKKLTNLNVDRNHLGTVPKELGGCACLNVLSLRDNRLGKLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDSNLNRVSVIQFQEETKAQEEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEERRNEAYTSRDEESPDSQEKRLSDLSNQSHDSQVSNSTLSATSHEERHNVTS
QREDLVDGHAPQYDDELDEMEVEYIEPTVHFAEEPIIRGLDDEEDREDGARSDEEERPVF
PAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLQGFNPESMNSPTKPAEEEEVEEEEEE
EEEEKEEEEEEEEQGMCTPQHHPRMEALEDSRLQVNSSLVKTNQNMYWQSWNVRSNDPCL
CNMGVKFDQVNNLLIEPARIEEEEHSLIIMRQTGGLGISIAGGKGSTPYKGDDEGIFISR
VSEDGPAARAGVKVGDKLLEVNGVDLHEAEHHTAVEALRSSGASVSMSVLREHMVEPENA
ITTTPLRPEDDYFPRERRSSGIAFNIETAPKGPQERLSTCLMRNDKGLGFSIAGGKGSTP
YRTADTAIYISRIAEGGAANRDSTLRVGDRVISINGVDMTEARHDQAVALLTGTSPTIAL
VVERDLNAPGGSPGQSRARAHSPPPPEPSDSPDQEEDGLTMHGNNLSRMEDEYPIEEVIL
LKSGGPLGLSIVGGSDHASHPFGINEPGVFISKVIPNGLACESGLRVGDRILEVNAIDLR
HATHQEAVRALLANKQEIRMLVRRDPSPPGMQEIVINKQPGEKLGISIRGGAKGHAGNPF
DPTDEGIFISKVSSSGAAARDSRLKVGMRILEVNNHSLLGMTHTEAVRVLRAVGDSLVML
MCDGFDPQKMTGVEASPGIIANPFATGIVRKNSMESISSIDRDLSPEEMEIMQKESEMVR
ETSQWEREEMEKVERMRLEREEANRLLEEETENMGTGPLKLDYKTLAALPTTSLQKLNRA
PPSDFNRTESPIRDAPYSPTIQPANLHYTSTPTAIENSPSSTRPGAIQPVGRMRQSPSPG
TPEGHSPNPFQHGPSPFNSQTSDQYGVRNNFHPKEPSPEPELMNEVFDDVIDGQEGAGLS
RHGSPRPHLSPDRREYLSLAAVPRLSRPSWDLQSPSPGGRGSPEQRSFRDRQKYFEIDVK
QQTPEKPKPRVSLVGEDDLKKMREEEERKFEQRAREYLMDEDEEDEEEDLAKQVAQMKAT
GKVLLDGVEYNVEPVSTPTQHCATPPCYNVTPPSYCGSSGPSSVDGKGDSQRNSLEDSFR
MEQRPNSMTGLIPAYTGDSAAPIRTAKAERRHQEKLRMQSPELSVASDKDLSPAEKRALE
AEKRAMWRAARMKSLEQDALKAQMVIAKSRDGKKRGTLDQLTESPSPAPTPSPTPMEELS
PRGVTSPGRLSLSSKKFDYRQFAAIPSSKPVYDIQSPDAVEELQFIDDGSSNPVPAASPE
AEVPPPLPTTSALEEMALYSNKRKLRQGRRSLETAVPT
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgttgcaaccgccacgtcgagtcggtggacaagcgg
cattgcaacttgcagacagtccccgatgaggtattccgctacagtcgcagcctggaggag
cttctcctcgatgccaaccaactcaaagagctaccaaagcctttcttcagactactgaac
ctacggaagctcggcctcagtgacaatgagatccagagactccctcccgaggtggccaac
ttcatgcagctggtggagcttgacatctccagaaatgacattcctgagatccccgagagc
attaagttttgcagggccttggagatcgccgacttcagcggaaaccccctcaccagattg
ccggatggtttcactcaactgcgaacgctggctcacttggcactcaacgacgtgtcattg
cagacattgcccaatgacattggaaacttggccaacctggtgacgttggagctcagggac
aaccagctgaagtcgctgcctacgtccctctccttcctggttaaactggaacagctggac
ctgggcagcaatgaactggaagttttgccggacaccctcggtgctctccctaatcttagg
gagctctggctggaccgtaaccagttgtcctcattaccaccagagctggggaacctccgg
agactggtgtgtctggatgtgtcagagaatcgtctggaggagcttccctcagagctgaac
ggcctcctggcgctcactgacctgctgctcacacagaaccagctggaagacgtcccagac
agcataggatgcctgaaacagctttctatcttcaaagtggaccaaaacagactgacccaa
ctgactgattcaataggagagtgtgaaaacctcacagaactcgtcttaacagagaacctt
ttagagtcacttcctcgctcgctgggcaagctgaagaagctgaccaacctgaatgtagac
cgcaaccatttgggcaccgtgcccaaagagctgggcggctgtgcctgtctcaacgtcctc
tctctcagagacaatcgcctgggcaaactgcccgctgagctcgcagatgccactgagctg
catgtgctggatgtggccggaaatagattacaaaacctgccttttgccctgacaaacctc
aacctgaaggccatgtggctcgcagagaaccagtcacagcccatgctcaagttccagaca
gaggatgatgagcagacaggagagaaggtgctgacctgctatctactgcctcagcagcct
tcccccagcctcgagaacttgctacagaacagtgtggacgacagctggacggacagcaac
ctgaacagagtgtcagtcattcagttccaggaagagaccaaggctcaggaggaggacgat
gaggctgctgcagagcgcagaggtcttcagcgaagagctacaccgcaccccagtgagctg
aaggtgatgaagaaggtgattgaggagaggaggaatgaagcttacacatccagggatgaa
gagtctcctgattcacaggagaaacggctcagtgacctctccaatcagagccatgactct
caggtgtccaatagcacgctgtcggccacctcccatgaggagaggcacaatgtgacgtcg
cagagggaggaccttgtagatggccacgcccctcagtatgatgacgagctggacgagatg
gaagtggagtacattgagcccactgtgcactttgcagaagagcccatcatccggggtttg
gatgacgaggaggacagggaagatggcgcgaggagtgacgaggaagagaggcctgtgttt
cccgcagagaagcagcgtctgatcagaaaggacacgccgcactacaagaagcacttcaag
atcaccaagctgcccaaacctgagactgtggctgccctgctgcagggcttcaaccccgag
agcatgaactctcccacaaagcctgcagaggaagaggaagtggaggaggaggaggaggag
gaggaggaagagaaggaggaggaggaggaggaggaagagcagggtatgtgcacccctcag
caccatcccaggatggaggcgctggaagacagtcggctccaggtcaactccagtctagta
aagaccaaccagaacatgtattggcagagctggaatgtgagatccaacgatccttgtttg
tgtaatatgggggtgaaatttgatcaagtcaataatctgctgattgaacctgctcgaatt
gaggaggaagagcactcgctgatcatcatgcgacagactggcggcctcggtatcagcatt
gctggagggaaaggatctacaccttacaagggagatgatgagggaattttcatctccaga
gtatctgaagatggccctgccgcaagagcaggggtaaaagtgggggacaaactcctagag
gtgaatggagtggacctccacgaagcagaacatcacacggcggttgaagctcttcggagc
tctggtgcttcagtttccatgtcggtgctgcgggagcatatggtggagccggagaacgcc
atcaccaccacgccactgaggccggaagacgactatttcccccgcgagagacggagcagt
ggcatcgccttcaacatagagacggctcccaaggggccacaggagcggctctccacctgc
ctgatgcgaaacgacaaggggctgggcttcagcatcgcagggggcaaaggctccaccccc
taccgcacagcagacacagcaatctatatctctcggatcgcagaagggggagcagcaaac
agagacagcacactgcgtgtcggcgacagagtgatctccatcaatggtgtagacatgaca
gaggccaggcatgaccaggcagtagcactccttaccggcacctcccccaccattgccctt
gtggtggagcgagacctgaatgcaccagggggctctccaggtcaatcccgggcacgagcc
cactcccctccacccccagaaccctcagactcaccggaccaggaggaggacggcctcacc
atgcatgggaacaacctgagccgcatggaggacgagtatcccatcgaggaagtgatcctg
ttaaagtcaggcgggccactaggcctgagcattgtgggaggcagtgatcatgccagtcac
ccgtttggcatcaatgaacccggggtgttcatctcaaaggtgattcctaacggcctagcg
tgtgaaagtggactgcgtgtcggggaccgaattttggaagtgaacgccatcgatctgcgt
cacgccacacaccaggaagctgtgcgtgcgctgctggccaataagcaggagatccgtatg
ctggtgcggagggacccttccccgcctgggatgcaggaaattgtaatcaataagcagcca
ggggagaagctcggcatcagtattcgtggaggggccaagggtcacgcaggaaaccccttt
gaccctacagatgaaggcatcttcatctctaaggtgagttcgagcggtgctgcagcaaga
gacagcagactgaaggttgggatgcgtatcctggaggtgaacaaccacagcctgctgggg
atgacgcacacagaggcggtgcgagtgctccgggctgtgggagactctctggtcatgctg
atgtgtgacggattcgacccacaaaaaatgacgggcgtggaggcgtctcccggcatcatt
gccaacccatttgccaccggcatcgtccgtaagaacagcatggagagcatctcatctata
gaccgagacctgagcccggaggagatggagatcatgcagaaggagtctgagatggtgaga
gagacatcacagtgggagcgagaagagatggagaaagtggagcgtatgcgcttggagcga
gaggaggcaaaccgcctgctagaagaggagactgagaacatgggcactggacctttgaaa
cttgactacaaaaccctggcggctctgcccaccaccagtctgcagaagctcaacagggcg
cctccttctgacttcaacaggacggagagcccaatcagagacgccccctactcccccacc
atccaaccggcaaaccttcattacacttcaactccaactgctatcgagaactctccatct
tcaacacgaccgggtgccatccagccagtggggcgcatgcggcagagcccctcccctggc
acaccggagggccacagtcctaaccccttccagcatggcccctcccccttcaactcccag
acctctgaccagtatggtgtcaggaacaatttccaccccaaggaaccttctccagagcct
gagttgatgaacgaggtgtttgatgatgtcatagacggtcaggagggggctggtctgagc
cgccacggctcccccaggccccacctctctcctgaccggcgggagtatctgagcctggcc
gcagtgcctcgcctctccaggccgtcctgggacctgcagagtccctctcctggtggtcgg
ggcagcccagagcagcgctcctttagggacagacagaagtattttgagattgacgtgaag
cagcagacaccagaaaaacccaaacctcgagtgtctcttgttggagaagatgaccttaag
aaaatgagggaagaagaagagaggaagtttgagcagcgggcgcgggagtacctgatggat
gaagacgaggaggacgaggaggaggatctggcgaagcaggtggcgcagatgaaggccacc
ggcaaggtgttgctggacggagtggagtacaacgtggagccagtgtctacccccacccag
cactgcgctaccccaccttgctacaacgtcacgccgcccagctactgtggcagctcaggg
ccttcttctgttgatggtaaaggagattctcagaggaactcactagaggacagcttcagg
atggagcagagacccaactccatgactggtctgatcccagcgtacaccggggactctgcg
gcccccatccgcacagccaaagcagagcggcggcaccaggagaagctccgtatgcagagc
cccgagctgtctgtggcctccgacaaggacctgtcccctgctgagaaacgagctctggag
gccgagaagagagccatgtggagggcagcacggatgaagtctctggagcaggatgcactg
aaagctcagatggtcatcgccaagtctcgggacggaaagaagcgtgggacactcgaccag
ctgacagagtcgccctcgcccgcccccaccccctctcccacacctatggaagagctcagt
ccccgaggagtcacctctccgggtcggctgtccctgtcgtcaaagaagtttgactaccga
cagtttgctgccattccttcttccaaacccgtatacgacatccagtcccctgacgcagtg
gaagagctgcagttcatcgacgacggctccagcaacccagttcccgctgcgagccctgag
gctgaggtgccccccccgctgcctaccacctcggccctggaggagatggccctgtacagc
aacaagcgcaaactgaggcagggccgccgcagcctggagaccgccgtgcccacgtaa
DBGET
integrated database retrieval system
