Trematomus bernacchii (emerald rockcod): 117496718
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Entry
117496718 CDS
T09643
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117496718 (irx6a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117496718 (irx6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
UIM
Motif
Other DBs
NCBI-GeneID:
117496718
NCBI-ProteinID:
XP_034004347
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MVTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTAGSQTAAAASFCCPS
YENRILASSRTELNAALGMYSSPYAAAAAATQNYANYFPYSTDPSAIYSTLNPQYDIKDS
TGTLHSGISQTAAYYPYDHSLGQYQYDRYGTVDFNGSARRKNATRETTSTLKTWLYEHRK
NPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKANDDRKDDFNKSE
DCLTKDSSDCKEEKDLRLSDLEDMDDDDCEKLDSDCEKGAADEQDLQRVMALSGPPQKRD
CSSELHLSLTNSFHAFPCAIKGVTSLPPLPSDFLDPVGSKAPSSTGGTLSLSHFEASDKP
RIWSLARTAASGVILSPQQHGSELRTGNTTGDCQLQSPRLTGTLTGQCGGMRGLHESGGV
TNTESPFAEGLSLHSKVYGTGSYSHKDLQLHCSSYSALPDTCQYSTIEGFSGGKAETQSS
DLSEACGTVQDDKVTAFRPVMKR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagctatgtctttctcgcaatttggatatccttacaatgcaact
tcacagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgacgggacagccggctcccagactgccgccgccgcctccttctgctgcccgtcc
tacgagaaccggatcctggcgagcagccggacggagctgaacgcggcgctggggatgtac
agctctccatacgccgcagcggctgccgccacccagaactacgccaactacttcccctac
agcaccgacccatccgctatctactccactctgaatccacagtatgacattaaggacagc
acaggcactttacactctggcatctctcaaacggctgcttactatccttacgaccactca
ctgggacagtatcaatacgacagatacgggacagtagactttaatggctcagccaggaga
aagaacgcaactcgtgaaactaccagcaccctaaaaacatggttgtacgagcaccggaag
aacccctaccccactaaaggagagaagatcatgctggccatcatcaccaaaatgaccctc
acacaagtgtccacctggttcgccaacgccaggaggaggctaaagaaggagaacaagatg
acctggtcaccaaagaataaggccaacgatgacaggaaggatgactttaacaagagcgaa
gactgtctcaccaaagactccagtgattgcaaggaggagaaggatctgcgtctgagtgac
ctggaggacatggacgacgatgactgtgaaaagctggacagcgactgtgaaaagggggct
gcagacgagcaggacctccagagggtcatggcgctatccggaccccctcaaaagagagac
tgcagctccgagctccacctgagtttaactaacagcttccacgcgttcccctgcgccatc
aaaggtgttaccagcctcccccctcttccgtctgacttcctggatcctgtcgggtccaag
gcaccttcctcaacggggggaacgttgtccctgtctcactttgaagcatcagataagcct
cggatttggtctctggctcgtacggcggcttcgggggtcattctgagcccccagcagcac
ggctcggagctgaggacaggcaacacaaccggggactgccagctccagagccccaggctt
accggcactctaactggacagtgtgggggtatgagaggcctccatgaatctggcggtgtc
accaatactgagagccccttcgctgagggcttatccttgcactctaaagtctatggcact
ggcagctacagtcacaaggacctccaactgcactgttcctcctattctgcactcccagac
acatgtcagtactccactattgaagggttctctggtggcaaagcagagacacagtcgtct
gaccttagtgaagcctgcgggaccgtgcaggatgacaaggtcactgcgttcagaccagtg
atgaagaggtga
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