Trematomus bernacchii (emerald rockcod): 117496748
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Entry
117496748 CDS
T09643
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1
KO
K13129
survival motor neuron protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117496748 (smn1)
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
117496748 (smn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
BUD22
TUDOR
PML_CC
Vma22_CCDC115
Motif
Other DBs
NCBI-GeneID:
117496748
NCBI-ProteinID:
XP_034004378
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MANGYKDTLFSRGGGQSDDSDIWDDTALIKAYDKAVTSFKTALKGDEEPEASKKNLPGKK
RKNNKKNQSRKRVNADKEWQVGDSCNAYWSEDGQLYAANISSIDEDKGTCIVVFTGYGNE
EEQNLEDLLSEISEADEETNVEVKETETSTEESDRSATPNQHKQQHSKPQKSKGNRQPPP
MWVPGFPGLPPGFPPGPPPMHAFRQGGSRRSGGHGPAPPSWPPMMPCGPPMIPPPPPMSP
DMVDDEALGSVLISWYMSGYHTGYYLGLKQGRKEAANWTKLHHK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatggatacaaagacacgttgttttctcgtggaggtggacagagtgatgattct
gatatatgggatgacacagcattgataaaggcttatgacaaggcagtcacatcattcaag
actgcccttaagggtgatgaagagccagaagcctccaagaaaaacctacctggaaaaaaa
cgcaagaacaacaagaagaaccagagcaggaaaagagtcaatgcagataaagagtggcag
gttggggactcttgcaatgcgtactggtctgaggacggccagctctacgcagccaacatc
tcctccatagacgaggataagggcacttgtatagttgtttttacaggatatggcaacgag
gaggagcaaaaccttgaagacttgctttcagagatttccgaggctgatgaggaaacaaat
gtcgaggtaaaggagacggaaacgtcaacagaggagagtgaccggtcagccacacccaac
caacacaaacagcagcacagtaaaccacagaagtccaagggcaacagacaaccccctcct
atgtgggttcctggtttccctgggttacctcctgggtttcctcctgggccgccccccatg
catgctttcagacagggtggaagcagaagatccggtggtcacgggcctgcacctccttcc
tggcctcccatgatgccttgtggtcctccaatgatccccccccctcctcccatgagccct
gacatggtggatgacgaggctctgggcagcgtgctgatctcctggtacatgagtggatat
cacactggatactacttggggttgaaacaaggacgcaaagaagctgccaattggaccaaa
ctgcaccacaaatga
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