Trematomus bernacchii (emerald rockcod): 117496800
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Entry
117496800 CDS
T09643
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117496800 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117496800 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117496800 (usp30)
04121 Ubiquitin system [BR:
tben04121
]
117496800 (usp30)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117496800 (usp30)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117496800 (usp30)
Membrane trafficking [BR:
tben04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117496800 (usp30)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117496800 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
117496800
NCBI-ProteinID:
XP_034004455
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MLWCRPESSDKLVKEFLGSGQIVRNKMIKNWGVIGGVAAAVAAGVYVLWGPITDRRKRKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLETVIGLPPTQSCKDNQLSTTLLQLLNGL
SRDEPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLDEERDRQPKIVPLF
DMQSLESIPDQDEKTMTCRSRAPLHPIPSPWKSQNPFHGCLTSNMSCKRCEQQSPVRYDS
FESLSLSIPLPQWGRPVSLDQCLQHFISSETIKEVDCENCTKLQQGTSVNGEVLGSQRTT
FVKQLKLGKLPQCLCIHLQRLTWSNEGSPIKRPEHVQFTEYLSMGRYKHNAHTHRSQRIK
CALNPKKAESSDDSTEKLSANGTGAEHPDNNNKPFSNGTFPSVFLQSPGLNPQHGFTNDF
SSTEYLFQLTAVLVHHGDMHSGHFVTYRRSPCSARPSSPFSSQWLWVSDDSVRKATLQEV
LSSNAYMLFYERVRRLDLAPRSEE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtgcagacctgaaagctctgataagcttgtgaaggagtttcttggctctgga
caaatcgtcagaaacaaaatgataaagaactggggtgtcatcgggggggtagctgctgcg
gttgcagctggagtctatgtgttgtggggcccaattacagatagaaggaagagaaagaga
ggtatggttcctggtttgttgaacttaggcaacacctgcttcctgaactctttgcttcag
ggtttggcagcatgtccgtctttcatccggtggctggagacggtaataggattgcctcca
acccagtcctgcaaagacaatcagctgtccacgacactgctccagctactcaatggtctg
tccagagacgagccgggggaggaagatgttctcgatgccgggtgcctcctggatgttctc
cgactgtaccggtggcacatcagttcctttgaagagcaggatgcacacgagctctttcat
gttcttacgtcttctctggatgaggagcgagatcgtcagccgaaaatcgttcccttgttt
gacatgcagtccctcgagagcattcctgatcaagatgagaaaactatgacctgcagaagt
cgagcccctctgcatccgataccaagtccttggaagtctcagaatccttttcatggttgt
ttaacaagcaatatgtcatgcaagcgctgcgaacaacaaagtccggtgcggtacgactca
tttgagagcctttccctgtccatccctttacctcagtggggtcgacctgtctctctagat
cagtgtcttcaacattttatctcttcggaaaccatcaaagaagtggattgtgaaaactgc
accaagcttcaacaagggacctcagtaaatggcgaagttcttggaagccagaggacaaca
tttgttaaacagcttaaactgggaaagctcccccaatgcctctgcatccatttacaaaga
ctgacgtggtccaacgaaggctcccccatcaagagaccggagcatgtgcagtttacagag
tatctctcgatgggccgctacaaacacaacgctcacacacacagaagtcagcggatcaaa
tgtgctctgaaccccaaaaaggcagaaagttcagatgattccacggaaaagctctctgct
aacggcaccggagcagagcatccggacaacaataacaaacctttttccaacggaacattt
ccctctgtgtttcttcagtctcctggtttgaacccacagcacggcttcacaaatgacttc
agttctacagagtaccttttccagctcacggccgtgctggtgcaccacggcgacatgcac
tcgggacacttcgtgacgtaccgccgcagcccctgctcagcccgcccctcctcacccttc
agctcccagtggctctgggtgtccgacgactcggttcgaaaggccaccctgcaggaggtg
ctgtcgtccaacgcctacatgctcttctacgagagagtccggaggctggacctcgctccg
cgctcggaggagtaa
DBGET
integrated database retrieval system
