Trematomus bernacchii (emerald rockcod): 117496815
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Entry
117496815 CDS
T09643
Symbol
spaw
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04060
Cytokine-cytokine receptor interaction
tben04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117496815 (spaw)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117496815 (spaw)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tben04052
]
117496815 (spaw)
Cytokines and neuropeptides [BR:
tben04052
]
Cytokines
Transforming growth factors (RSTK binding)
117496815 (spaw)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
MIR
PRIMA1
Motif
Other DBs
NCBI-GeneID:
117496815
NCBI-ProteinID:
XP_034004479
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MEVHSVFCTFLLCSFGVVFSSHGHRFLTGPETSLALRNLSFNHRSSYPLYMMQLYRSFKT
ADFSSSVAVNTVTMQGDSPSAHSSDSVLSLTARGCHQEGEKWTVTFDMSSISASELVQLA
ELRIRLPAFSKSKRPTVDLYHSRKQSCELGSKSCQDEHLFLGSFSTSASSSKSTWKVFNV
TALLNFWLYQGDRLSSQEASGEPDADHGSGTGDEGEVSGQFLFKTLGLRQRKIHHPTMNR
VMMVVFSKHHVPQEGHTAYSLIHTVENSKYVTMDRVSSRSRRHKRNRMERMRVPAGPTPP
PPNPPPTPPAASAAASAAAEPSQRPLCRRVDMWVDFDHIGWDEWIVHPKRFNAFRCEGEC
PTPLDESFNPTNHAYMQSLLKYHHPERGSCPSCVPTRLSPLSMLYYESDDLTLRHHEDMV
VEECGCH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggaagtccattcggttttctgcacgttcctcctctgctcttttggggttgttttctcc
agccatgggcacagatttctcacaggccccgagaccagtttagcgttgagaaatctgtca
tttaatcatcgcagcagttatcccctgtacatgatgcaactgtaccgctcctttaagact
gctgatttctcctcgtctgtagctgtcaacaccgttacaatgcaaggtgacagcccgtca
gcgcacagctctgactccgtgctgagtttgacagccagaggttgccatcaagagggtgaa
aaatggacagtcacttttgacatgtcatccatctctgctagtgagcttgtccagttggca
gaacttcggatcagactgcctgctttctccaaatctaagcgtcccactgtggatttatat
cactccagaaagcagagttgtgagctgggcagcaaatcatgccaggatgagcatcttttc
ctggggagcttcagcacatcagccagcagctcaaagtccacctggaaggtttttaatgtg
accgctctgttaaacttctggctgtaccagggagacagactgtcgagccaggaggcctca
ggagaacctgacgcagaccatgggagcggtaccggggacgaaggggaggtctctgggcag
ttcctcttcaagactttgggattgaggcaaagaaaaatccaccacccaaccatgaaccgg
gtcatgatggtcgtcttctccaaacaccacgtgccccaggaaggccacacagcatacagt
ctcattcacactgtggagaactccaagtatgtgaccatggacagagtcagcagccgaagt
cgacgccacaagaggaacaggatggagaggatgagggtgcctgcaggacctacacctcct
ccacctaaccctccacctactcctcctgcagcatcagcagcagcatcagcagcagcagag
ccgtcccagcggccgctgtgtcgcagggttgacatgtgggtggacttcgaccacatcggc
tgggacgagtggattgtgcaccctaagcgcttcaatgcatttcgctgtgagggagagtgt
cccacaccactggatgagtccttcaaccctaccaaccatgcgtacatgcagagcctcctg
aaatatcaccatccagaaagagggtcctgcccgtcctgtgtgccgacgcgcctcagcccg
ctctccatgctgtactacgagagcgatgatttgacccttcggcatcatgaggacatggtt
gttgaagagtgtggatgtcactga
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