Trematomus bernacchii (emerald rockcod): 117496868
Help
Entry
117496868 CDS
T09643
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117496868 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117496868 (rab11fip1a)
Membrane trafficking [BR:
tben04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117496868 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF7783
Motif
Other DBs
NCBI-GeneID:
117496868
NCBI-ProteinID:
XP_034004581
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MSLADQSQTWFPTSVQVTVHQARNLRPKGKNGTNDAYAIMQVAKDKFSTSVSEKCIAPVW
KEEASFDLPLFHPGNADRCTLHIIVMHRAQVGLDKFLGQAVVNLLDLHDNKSSKKTDWFK
MVDKSGKEDKARGEVLLDIQFMRNNMSASMFDLSMQDKPRSRISKLKDKVRGKKKDGFSD
SASAIVPSVSNVLTDSEGEADAQSLNPSPGVKKKSRLKTLFAPKSNLQKNMSQSMSTLGT
LPEKNSSLSSSRSSGLNVDSPDVKRKFKFLGHKRTGSSDSKVSQGAFSLLGRHKHSNSDI
NSTCINGNHVYAEDEEPESGSTLSLNSSGQGSVEDVRKHTTEVPVDAFVSVPSYKQESDQ
KAILEQQRHQEEEGRIAEAKRLVEEEKYKIQLKRLKEEEDLRVQEEQERKRRFLEDEAKR
KEDEERKKQEEAAEVQKLEDERRKAEEQKRQEDASMSDRLSSLFGMIRKKEEKKEEPQTK
EEFPTKSPRSISEDPEQPTSHRSANPFEDISLSPDQALNESPADHQKSSRTPQGPSAMTF
LNRSAKVSAVKPRFTPSLESEPADCQTPSQPCPSPETSDTSLSSVPSESPDTFSSLHSSL
APPNISQSPSGSPRGSVEDLSSVGSSPTMADKKRRAPGTPSYSGHGSLNGGNTAPVREIT
NPAYVEAERPQPGGKVSIPLPDYESLFPQKRHGVQGHTRWDHLIAEVNQKHRDSSEMSVD
GPEEQRPSVKASVPQESAASRYFQSRSQDIKSISTKKAAAPAPPKSIAPPQPRSVADSPQ
RQSQSTAQQYPMRHNLPAVPEPVSTNRESPSGMSRDGPRKALRPSTAATHAPRPTSQMDS
HAPLNDQVGVNKEIPTAKPRQRASGRDSVLQEDSAATPVVSDKHLKSNLQTSSRSSMSNV
DTKGRQVSENLDFDPFPITDLISKDPWAPPKGHQKEDLFTGSVQKEPTVEDLGMTPDDLD
SIFGQEKLSDPFADFNGSGSNKHSEVIEQVEDPKQVNPAFQRNNSNRGRRTPQSTTLSAD
RSSKSRQEPAFKEETTATTANKAPSARGVRNESITPTPSADANTQNTFYGGEDQFGAEPF
ASVLNTSEPLEVVMEEPSSPAEDLSGGKAPLRAWVSPSDVQSVSAQNSNGGGIALTPRRP
HPVKPMNLESQQPISSPAVKDINIRDSTPGKTQNASSVQSGPYTQLTQEELITLVVRQQT
DLSRKDSKIVELEEYIDILLVRVIEEKPSILQSLTKPV
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccgaccagagccagacttggttccctacgagtgtgcaggtaacggtgcac
caggctcggaacctgcgtccaaagggcaagaatggcaccaacgacgcctatgccatcatg
caggtggccaaagacaagttttctacctctgtgtcggagaaatgcatcgccccggtgtgg
aaagaagaggcttccttcgacctgccgctcttccacccgggaaacgctgaccggtgcaca
ctgcatatcatcgtgatgcaccgggcccaggtggggctcgacaagttcctgggtcaggct
gtggtcaacctgctggacctccatgacaacaagtccagcaaaaagacagattggttcaag
atggtggacaagagtggaaaagaggataaggcgagaggggaggtgctgctagatatccaa
tttatgagaaacaacatgtcagccagcatgtttgacctttctatgcaggacaaaccacgc
tctcgcatctccaagctgaaggacaaagtccgtgggaagaagaaagatggtttctccgac
tctgcttcagctattgttccctctgtcagcaatgtcctcacagacagcgagggcgaggct
gacgcacagtcactcaacccgtctcctggagttaaaaagaaatcaaggctcaaaactctt
tttgctcccaaatcaaacttgcagaaaaacatgtcccagtccatgtccacactggggact
cttccagagaagaattcatctctcagcagcagccgctcatccggcctcaatgtagactct
cctgatgtcaaaaggaaattcaaattcctgggacacaagcggacaggcagctctgacagc
aaggtgtctcagggtgctttctccctcctgggtcgccacaagcacagcaacagtgacata
aacagcacgtgcatcaacggaaaccatgtgtacgccgaggacgaagagcccgagagtgga
tccactctcagtctaaacagctcaggacaaggatctgtagaggatgtccgcaaacacacc
acggaagtccctgtagatgcctttgtaagtgtcccctcctacaagcaagagtcagaccag
aaggcaatactggagcaacagcgccaccaggaggaggaggggcgcatagcagaggccaag
aggctggtggaagaggagaaatacaagatacagctcaagagactgaaggaggaagaggat
ctcagagtgcaagaggaacaggagaggaagagacgcttcctcgaggatgaagcgaagagg
aaggaggacgaagagaggaagaagcaagaggaagcagctgaagtacagaagctcgaagat
gagcgccgcaaagccgaggagcagaaacgtcaggaggacgcatccatgagcgaccgcctg
tcgtctctgttcgggatgatcagaaagaaggaggagaagaaggaagagccgcaaactaaa
gaggagtttccaacaaaatcccctcgcagcatctcagaagatcctgagcaaccgacctcc
catcgctccgccaacccctttgaggacatttccctcagtccagatcaagcacttaatgaa
agcccagctgatcatcagaaatccagccgcaccccacaaggcccctctgccatgaccttc
ctcaaccgctccgcaaaagtgtctgcagtcaaacccaggtttactccatctctagagtct
gaacctgccgattgccaaacccccagtcagccgtgtccttccccagaaacctctgacacc
agcctctctagtgtcccgtctgagtctcctgatacgttctccagtctccactcatccttg
gctccaccgaacataagccaaagcccgtccggttctcctcggggcagcgtagaggatttg
tcttctgttggatcttcaccaaccatggcagataagaaaagaagggcccctgggaccccc
tcgtactcaggacatgggagccttaatggtggaaataccgctcctgtcagagagatcaca
aaccctgcatacgtagaggcggagagaccgcagccaggtggaaaagtatccataccactt
cctgattatgaaagcctattccctcagaagagacacggagtgcaagggcacactcgatgg
gaccatctgatcgctgaggtaaatcagaaacacagggacagttcagagatgagtgtggat
ggtccggaggagcagcgacccagtgtaaaggcttcagtccctcaggagagcgctgcaagt
aggtattttcaatcccgatctcaggatatcaaatctatttcaacaaaaaaagcagcagcc
ccagctcctcctaaatcaattgcacctccacaacctcgatcagttgcagattctcctcaa
agacagagtcagagtaccgctcagcaatatcccatgaggcacaatctgcctgcagtccca
gaacctgtgagcacaaacagagaaagtccctcagggatgtccagggatggaccaaggaag
gcgttgcgcccatcaactgctgcaacacatgcacccaggccaaccagccaaatggactcg
cacgcaccattaaacgatcaagtcggtgtgaacaaagagatccccacagccaaacccaga
cagagggctagtggaagagactccgtgctgcaagaagattctgctgcgacaccagtggtc
tcagacaaacatttgaagagtaaccttcaaacatcgtctcgttcaagtatgagcaacgtg
gatacaaaaggcaggcaagtatcggagaacttggactttgacccattccccattactgat
cttatttccaaagacccgtgggccccaccaaagggacaccaaaaagaagacctttttacc
ggcagtgttcaaaaagagcccacagttgaagatttgggaatgacaccagacgatcttgat
tcaatctttggtcaagagaaactttccgatccatttgctgactttaacggcagtggttca
aacaaacacagtgaggtcattgaacaagtagaagatccaaagcaagtcaatcctgctttc
cagagaaacaattcgaacagaggaagacgaacccctcagtccaccactctctctgctgat
aggtcttccaagtctcgacaagaacccgcatttaaagaagaaaccaccgcaaccacagcg
aacaaagccccctctgcgagaggtgtcaggaacgagtctatcacaccgacgccttcagct
gatgcaaatacacaaaacacattttacggaggagaagatcaatttggagctgaaccgttt
gcctccgtgttgaatacctcagaacccctcgaggtggttatggaggagccgtcgtctccg
gcagaggatttgtctgggggaaaggcacctttgcgagcttgggtctccccatctgatgtt
cagtctgtcagtgctcagaatagcaatggaggtgggatagctttaactccacgcaggcct
catcctgtgaaacctatgaacttggagagccagcaacccatcagcagccccgctgtgaaa
gatataaatatccgtgacagcacaccagggaagactcagaatgcgtcctcggtgcagagt
gggccgtacacccagctgacgcaggaggagctgatcacgttggtggtgaggcagcagacc
gacctgtctcgaaaggactcgaagatcgttgagctggaagagtacatcgacatcctgctg
gtccgcgtcatagaggagaaacccagcatcctgcagtccctcacgaaaccagtgtaa
DBGET
integrated database retrieval system
