Trematomus bernacchii (emerald rockcod): 117496892
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Entry
117496892 CDS
T09643
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117496892 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117496892 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117496892 (pdlim2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
zf-HYPF
Motif
Other DBs
NCBI-GeneID:
117496892
NCBI-ProteinID:
XP_034004633
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MALTVNLIGPSPWGFRIYGGRDFKKAITVSKVNGGSKAEKADMQPGDIISEINGENTADM
LNVEAQNKIKNSKTQLQLMVERPDPPSSGQTNGTISPEQITGRFQEAVIVSRDENQNYKE
YTISSPASLSPGPYSPDPFGSSDGKRLTPTVNKSVTLRPWSPDEKSHRLSRPLSQEFSPS
DYRNNSVSSRTPTPPGRYSPHSPIDRDVPMSPRRSSSSSDFAMQKFDRDSEVYKMIQENK
ESRTAPRQSNTFKMLQEVLEADEKEAALRFPGLSPNIPKSSSSVGGVKNTHTCEKCGTGI
LTLAVRISDDRFRHAECYTCTDCGLNLKMRGHFCVGDVMYCEKHAKERYQGPGTSPQATI
SPRQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacggtgaaccttattggtccttcgccatggggcttcagaatatatggagga
agggacttcaagaaggccattactgtatcaaaggtcaacgggggtagcaaggcagagaag
gccgacatgcaacccggagacattatctctgagatcaacggggagaacacggccgacatg
ctgaacgtggaggcccagaacaagatcaagaactcaaagactcagctgcagctcatggta
gagagacccgaccctcccagctctggacagaccaacggcaccatcagccccgagcagatc
accggacgcttccaggaggcagtaatcgtgagtagagatgagaatcagaactacaaagag
tacaccatctcaagcccggcgtctctgtcccccggaccttactcaccagatccctttggc
agctctgacgggaagaggctgacacccaccgtcaacaagagtgtcacgctgcgcccgtgg
tctccagatgagaagagtcacaggctgtccagaccgctgtcacaggagttctccccttca
gactacaggaataactctgtgtccagcagaacccccaccccaccagggcgctactccccc
cacagccccatcgatcgggacgttcccatgtcccctcgtcgcagcagttcgagctctgac
tttgccatgcagaagttcgacagggactcggaggtgtacaagatgatccaggagaataag
gagtctcgcacggcgcctcggcagtccaacaccttcaaaatgctgcaggaggtcctggag
gccgacgagaaagaggcagcactgcgattcccaggactttcgcccaacattcccaaatca
agctcatcagtaggaggcgtcaaaaacacccacacctgtgagaagtgcggcaccggcatt
ctcaccctggccgtgcgcatctcagacgaccgcttccgccacgcagagtgctacacgtgc
acagactgcggccttaacctcaagatgagaggtcacttttgcgtcggagatgtgatgtac
tgtgagaagcacgccaaagagaggtaccaaggcccaggaacgtcccctcaggccaccatc
tccccccgccagtga
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