Trematomus bernacchii (emerald rockcod): 117496941
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Entry
117496941 CDS
T09643
Symbol
si:ch211-225b11.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117496941 (si:ch211-225b11.1)
Transporters [BR:
tben02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117496941 (si:ch211-225b11.1)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117496941
NCBI-ProteinID:
XP_034004693
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MDLSAEHLKTPGSDEKDFALKPLNVKVTGKESGEAQRPTWSNRMEFILASVGYAVGLGNI
WRFPYLCYRSGGGAFLFPYLTMVLLCGLPLLFMEFSIGQYTRLGPVHALARICPLLKGVG
LATVVISFVFCTYYNVLMSWALFYFFNSFEATLPWTSCNNTWNVVENCSSGFLGNTSHLQ
SASQQFFDRRLLQKTNGIEESGGVRWELFGYLIFSWVIVYLCIFKGVKSTGKVVYFTAVF
PYFILFALLINNVQLPGAKNGILYFVTPVWDKLFEVKVWVNAAAQVFNSIGIAFGSMISM
ASYNKFNNNILRDALIVSFTNFFTSILAGFVIFSAIGYMAHIHNLPVDNIASDGPGLVFV
VYPEVLSTMPVHQLWAPLFFFMLLCLGLDSQFATAEVAVTFIKDEFGPQVLRFIKREELL
TLAVCIVGFALGIPHVTKGGIYVFQLMDHYTAVVSLMFLAFFEVVAVCWIFGVPRICLMI
TRMLGKTANIYFRVCWGLLCPVLVLCILISSIVQYTPAHYETYTYPKWAEGVGWGVSLVS
IVWIPLGAIHEISSNKGSFLQRVKTAMIPTLDLDADYALPEKQNIDNPASENLMTSVA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggatctcagtgcagaacatttaaagacccccggctctgatgagaaagattttgctcta
aagcccttaaatgtcaaagtgactggcaaggagagtggagaggcgcagagacccacatgg
agcaaccggatggagttcatcctggcgtccgtggggtacgcggtgggtctgggcaacatc
tggaggttcccctacctgtgctaccggagcggcggaggtgccttcttgttcccttatctt
accatggtgctcctgtgtggccttcctctgctcttcatggagttttctattgggcagtac
actcgattagggccagtgcatgctctcgccagaatctgccccttgttgaaaggtgttggt
ctggccacagttgtcatttcctttgtgttctgcacctactacaatgtgctcatgagctgg
gcactgttttatttcttcaactcgttcgaggcgacgctgccctggacttcctgcaacaac
acctggaacgttgtcgaaaactgttccagtggtttcctcggcaacaccagccacctgcag
tctgccagccagcagttcttcgatcgcagacttctgcagaaaacgaatggcattgaagaa
agtggcggcgtgcgctgggagctctttggctatctcattttttcctgggtcattgtgtat
ttgtgcatatttaaaggagtcaaatcgacaggcaaggtcgtgtatttcaccgctgttttc
ccgtacttcattttgtttgccctgctcattaacaatgtgcagctccctggagccaagaac
ggcatcctctactttgtgacacccgtctgggacaaactgtttgaagtgaaggtttgggta
aatgcagcggcccaggtgttcaactccatcggaatagcatttggctccatgatttcaatg
gctagttacaacaagttcaacaacaacatcctcagggatgctttgattgtatcgtttacc
aacttcttcactagtatcctggctgggtttgtgatcttctcagctattggctacatggct
catatacataacctcccggtggacaacatagcttcagatggtcctggcttggtgtttgtt
gtgtaccctgaagtcctctccacgatgcccgtccatcagctgtgggctcctctcttcttc
ttcatgttgctgtgtctgggcctggacagccagttcgccacagctgaggtagccgtcacg
ttcataaaagatgagtttggcccccaagttctgcgtttcataaagagagaagagctgctg
accctggctgtgtgcatcgttggcttcgccctggggattcctcatgtgaccaagggaggt
atctacgtgtttcagctgatggaccactacacggccgtggtctccctcatgttcttggct
ttcttcgaagttgtcgctgtctgctggatctttggtgtcccacgtatctgcttgatgatc
acgaggatgctgggaaaaactgcaaacatctactttcgtgtctgctgggggctgctctgc
ccggtattggtgctgtgtatactgatctccagcattgtccagtacactcctgctcactat
gagacttacacctacccaaagtgggctgaaggggtgggctggggggtctctctggtctcc
attgtgtggatcccacttggagccattcatgagatctccagcaacaaaggctcatttctt
cagagagttaaaacagctatgattcccacactagacctggatgctgactatgccctgccg
gaaaaacagaacatagacaacccggcgtctgaaaacttgatgacttcagtggcatga
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