Trematomus bernacchii (emerald rockcod): 117496980
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Entry
117496980 CDS
T09643
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117496980
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117496980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
117496980
NCBI-ProteinID:
XP_034004753
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
GHGLNLFALVHRTAAAVCRRKLKSTLKERFQCVYEGIAKAGNPTLLNQIYTELYITEGGS
AEVNDEHEVRQIETASRKPDRPETTIRQEDLFKASPGRDAPIRAVMTKGVAGIGKTVLKG
PSLTQKFTLDWAEGKANQDFQFIFPLTFRELNVVRENKYSLVELVHYFFSETRDAGICRF
DQFPVVFIFDGLDECRLPLDFLNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRP
AAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDQEQAGTIFSHIKISRSLHIMCHIPI
FCWISATVLEEVLKTREGGELPKTLTEMCIHFLVVQSKVKNIKYDGGAETDPHWSPESRE
MMESLGKLAFEQLLKGNLIFYESDLTECGIDITAASVYSGVFTQVFREERGLYQDKVFCF
VHLSVQEFLAALHVHLTFINSGVNLLSDEPRTSQKSEDESELTHLYQSAVDQALQSPNGH
LDLFLRFLLGLSLQTNQKLLRGLLTQTGSVSEIKKETVKYIKMKIEEDLSPERSINLFHC
LNELNDRSLEEQIQWYLRSGRLSTDNLSPAQWSALVFILLSSGEDLDVFDLKKYSASEEA
LLRLLPVVKASRKALVCKLSERSCEALSSVLSSQSSRLRDLDLSNNDLKDSGVKKLCAGL
QSPHCELETLRLSGCLVTKEGCASLTSALSSNTSHLRELDLSYNHPGDSGVNLLSVLQED
PDWRLDTLRLDHGGEQWLKPGLMKYACELTLDTNTAHRKLQLSVNNRTVTRVREKQPYPD
HPERFDSLEQLMCREALTGRCYWEVEWSVWVHISVTYRGIRRRGNRGDSQFGRNDQSWSL
RCSDEGYSVWHNKTVTYISSSSSSSSSASSSSSSSASSSSFSSSSSSSRRVAVYLDHPAG
SLSFYRVSSDTLIHLHTFRTTFTEPLYAGFGFWSLNSSVSLCLWRRR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
ggccatggactcaacctgtttgccctggtgcaccgaactgctgctgcagtctgcagacgt
aaactcaaatccaccctgaaggagaggttccagtgtgtgtatgagggcattgctaaagca
ggaaacccaacccttctgaaccagatctacacagagctctacatcacagagggggggtct
gcagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccagac
agaccagaaacaaccatcagacaagaagacctctttaaagcctcacctggaagagatgca
ccaatcagagcagtgatgacaaagggtgtggctggcattgggaaaacagtcttaaagggc
ccatctttaacacagaagttcactctggactgggctgaaggcaaagccaaccaggacttc
cagttcatatttccattaactttcagagagctgaatgtggtgagagagaacaagtacagc
ttggtggaacttgttcattacttcttctctgaaaccagagacgcaggaatctgcaggttt
gatcagttcccggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggac
ttcctcaacactgagatcctgactgatgtcacagagtccacctcagtggatgtgctgctg
acaaacctcatcagggggaagctgcttccctctgctcgcctctggataaccacacgacct
gcagcagccaatcagatccctcctgagtgtgtggacatggtgacagaggtccgagggttc
actgacccacagaaggaggagtacttcaggaagagattcagagatcaggagcaggccggc
accatcttctcccacatcaagatctcacgaagcctccacatcatgtgccacatcccaatc
ttctgctggatctctgctacagttctggaggaggtgttgaaaaccagagagggaggagag
ctgcccaagaccctgactgagatgtgcatccacttcctggtggttcagtccaaagtgaag
aacatcaagtatgatggaggagctgagacagatccacactggagtccagagagcagggag
atgatggagtctctgggaaagctggcttttgagcagctgctgaaaggcaacctgatcttc
tatgagtccgacctgacagagtgtggcatcgatatcacagcagcctcagtgtactcagga
gtgttcacacaggtctttagagaggagagaggactgtaccaggacaaggtgttctgcttc
gtccatctgagcgttcaggagtttctggctgctcttcatgtccatctgaccttcatcaac
tctggagtcaacctgctgtctgatgaaccaagaacctcccagaagtctgaagatgaatct
gaactaacacatctctaccagagtgctgtggaccaggccttacagagtccaaacggacac
ctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcagaaactccta
cgaggcctgctgacacagacaggaagtgtctcagagatcaaaaaggaaaccgtcaagtac
atcaagatgaagatagaagaggatctgtctccagagagaagcatcaacctgttccactgt
ctgaatgaactgaatgatcgttctctagaggagcagatccaatggtacctgagatcagga
cgtctctccacagataatctctctcctgctcagtggtcagctctggtcttcatcttactg
tcatcaggagaagatctggacgtgtttgacctgaagaaatactctgcttcagaggaggct
cttctgaggctgctgccagtggtcaaagcctccaggaaagctctcgtctgtaagctgtca
gagagaagctgtgaagctctgtcctcagtcctcagctcccagtcctctagactgagagat
ctggacctgagtaacaacgacctgaaggattcaggagtgaagaagctgtgtgctggactc
cagagtccacactgtgaactggagactctcaggctctcaggctgtctggtcacaaaggaa
ggctgtgcttctctgacttcagctctgagctccaacacctcccatctgagagagctggac
ctgagctacaatcatccaggagactcaggagtgaatctgctgtctgttctacaggaggat
ccagactggagactggacactctcagactggaccatggtggagagcagtggttaaaacca
ggtctgatgaagtatgcctgtgaactcacactggacacaaacacagcacacaggaaactc
caactgtctgtcaacaacaggacggtgacacgtgtgagagagaagcagccatatcctgat
catccagagaggtttgactccttggaacagctgatgtgtagagaagctctgactggtcgg
tgttactgggaggtcgagtggagtgtatgggttcatatatcagtgacttacagaggaatc
aggaggagaggaaacaggggggactctcagtttggacggaatgatcagtcctggagtctg
aggtgctctgatgaaggttactctgtctggcacaataagacagtaacatacatctcctcc
tcttcttcctcctcctcctctgcctcctcctcctcctcctcctctgcctcctcctcttcc
ttctcctcctcctcctcctcctctaggagagtagcagtgtatctggatcatcctgctggc
tctctctccttctacagagtctcctctgacacactgatccacctccacaccttcagaacc
acattcactgaacctctgtatgctgggtttgggttctggtcattaaactcctcagtgtct
ctgtgtctctggaggaggagataa
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