Trematomus bernacchii (emerald rockcod): 117497141
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Entry
117497141 CDS
T09643
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117497141
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117497141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
LRR_6
PRY
PYRIN
NOD2_WH
SPRY
LRR_4
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
117497141
NCBI-ProteinID:
XP_034004941
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MTARPKLRAKSKQHILLDLDLDLDRDLKKDLDMYLNWKPGPEPGPELEPGPEPEPGPEPE
PGPEPVSSNQLTAGDQNQGEKMETPREVLLKTLEDLEEKDLKKFKWCLEGEVLKFPGIPK
SRLQKAADRMDTVDLMLPYYGIHTIKVTREVLKMIPRNDLEEELSKFPSDPEDILTKCQG
ELKSNLKETFENITFMEKSESLHKIYTEIYITRGHTTEVNKEHEIRQIEQASSKPDRSET
PIRQEDLFKGSTERGKPIRAVMTKGVAGIGKTVLTQKFTLDWAEGKAHQDIQFIFPFTFR
ELNVESDEKYNLVELVHHFFSETRDAGICKFDQFQVLFIFDGLDECRLPLKFHNTKVLTD
VTESTSVDRLLTNLIRGKLLPSARLWITTRPAAANQITEFVDMVTEVRGFTDPQKEEYFR
KRFRDQEQAGTIISHIKTSRSLHIMCHIPVFCWISASVLEDMLKTEGGELPKTLTEMYIH
FLVVQSKVNVKYDEGAETDPHWSPESRKKMMESLGKLAFEQLQKGNLIFYESDLTECGID
ITAASVYSGVFTQVFKEVRGTYKNTVFCFVHLSVQEFLAALHVHLTIINSGVNLMAPWWS
KAFRQKPKHLYQNAVHKALQSPNGHLDLFLRFLLGLSMETNQTLLHDLLTQAVSGSQTNQ
KTVKYIKEKIRKNPSPEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTEDLSPAQWSAL
VFILLSSKEDLDVFDLKKYSASEEALLRLLPVVKAFRKALLSGCNLSERSCEALSSVLSS
QSSSLRDLDLSNNDLPDSGVKLLSGGLEGQHCTLETLRLTGCNLSERSCEALSSVLSSQS
SSLRDLDLSNNDLQDSGVKLLSGGLEGQHCTLETLRLTGCNLSERSCEDLSSVLSSQSSR
LRDLDLSNNDLQDSGVKLLSAGLESPHCELETLSLSGCLVTEEGCVSLASALRSNHSHLR
ELDLSYNHPGDSGEKLLSAGLEDPLWRLDTLRLDHGGEQWLRPGVRKYPCELTLDSNTAH
RKLKLSEDNRTVTRVREEEQQPYPDHPERFERWPQLMCREALTGRCYWEVEWRGEVFIAV
TYRGIRRKGGGCWFGKNDQSWSLICSDEAYSVYHNKSETHIYSSSYPSSSRRVAVYLDHA
AGSLSFYSVSSSSLILLHTFRARFTEPLYAGFLVWSEDSSLVCSVSLCPL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgacagccagaccaaagctcagagccaagagcaaacaacacattctgctggacctggac
ctggacctggacagggatctgaagaaggacttggacatgtatctgaactggaaacctggt
cctgaacctggtcctgaacttgaacctggtcctgaaccggaacctggtcctgaaccggaa
cctggtcctgaacctgtgtccagtaaccagcttactgccggagaccagaaccagggagaa
aagatggagacacctagagaagtcctattaaaaactttagaagatttggaggaaaaggac
ttaaaaaaattcaagtggtgcctggagggggaggtcctaaaattcccaggaatcccaaag
agtcgactacagaaagcagcagaccggatggacacagtggatctgatgcttccgtactac
ggcatacacaccattaaagtgaccagagaagttttgaagatgatcccgaggaatgatcta
gaagaggaattatcaaaattcccatcagaccctgaagatattctcactaagtgccaaggt
gaactcaaatcaaacctgaaggaaacatttgaaaatatcacatttatggaaaaatctgaa
tccctacataaaatctacacggagatctacatcaccaggggacacaccacagaggtcaac
aaggaacatgagatcagacagatcgaacaagcatccagtaaaccagacagatcagaaaca
cccatcagacaagaagacctctttaaaggctcaactgaaagaggtaaaccaatcagagca
gtgatgacaaagggcgtggctggcattgggaaaacagtcttaacacagaagttcactctg
gactgggctgaaggcaaagcccaccaggacatccagttcatatttccattcaccttcaga
gagctgaatgtggagagtgatgaaaagtacaacttggtggaacttgttcatcacttcttc
tctgaaaccagagacgcaggaatctgcaagtttgatcagttccaggttctgttcatcttt
gacggtctggatgagtgtcgacttcctctgaaattccacaacactaaggtcctgactgat
gtcacagagtccacctcagtggatcggctgctgacaaacctcatcagggggaagctgctt
ccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatcactgagttt
gtggacatggtgacagaggtccgagggttcactgacccacagaaggaggagtacttcagg
aagagattcagagatcaggagcaggccggcaccatcatctcccacatcaagacctcacga
agcctccacatcatgtgccacatcccagtcttctgctggatctctgcttcagttctggag
gacatgttgaaaactgagggaggagagctgcccaagaccctgactgagatgtacatccac
ttcctggtggttcagtccaaagtgaacgtcaagtatgatgaaggagctgagacggatcca
cactggagtccagagagcaggaagaagatgatggagtctctgggaaaactggcttttgag
cagctgcagaaaggcaacctgatcttctatgagtccgacctgacagagtgtggcatcgat
atcacagcagcctcagtgtactcaggagtgttcacacaggtctttaaagaggtgagagga
acgtacaagaacacagtgttctgcttcgtccatctgagcgttcaggagtttctggctgct
cttcatgtccatctgaccatcatcaactctggagtcaacctcatggccccctggtggtct
aaagccttcagacaaaaacctaaacatctctaccagaatgctgtgcacaaggccttacag
agtccaaacggacacctggacttgttcctccgcttcctcctgggtctttcaatggagacc
aatcagaccttattacacgacctgctgacacaggcagtaagtggctcacagaccaaccag
aaaacagtgaaatacatcaaggaaaagataagaaagaacccgtctccggagaaaagcatc
aacctgttccactgtctgaatgaactgaatgatcgttctctagtggaggagatccaacag
tccctgagttcaggaagtctctccacagaggatctgtctcctgctcagtggtcagctctg
gtcttcatcttattgtcatcaaaagaagatctggatgtgtttgacctgaagaaatactct
gcttcagaggaggctcttctgaggctgctgccagtggtcaaagccttcaggaaagctctg
ctgagtggctgtaacctgtcagagagaagctgtgaagctctgtcctcagtcctcagctcc
cagtcctctagtctgagagatctggacctgagtaacaacgacctgccggattcaggtgtg
aagctgctgtctggtggactggagggtcaacactgtactctggagactctcaggttaact
ggctgcaacctgtcagagagaagctgtgaagctctgtcctcagtcctcagctcccagtcc
tctagtctgagagatctggacctgagtaacaacgacctgcaggattcaggagtgaagctg
ctgtctggtggactggagggtcaacactgtactctggagactctcaggttaactggctgc
aacctgtcggagagaagctgtgaagatctttcctcagtcctcagctcccagtcctctcgt
ctgagagatctggacctgagtaacaacgacctgcaggattcaggagtgaagctgctgtct
gctggactggagagtccacactgtgaactggagactctcagtctgtcaggctgtctggtc
acagaggaaggctgtgtttctctggcttcagctctgagatccaaccactcccatctgaga
gagctggacctgagctacaatcatccaggagactcaggagagaagctgctttctgctgga
ctggaggatccactctggagactggacactctcaggctggaccatggtggagagcagtgg
ttgagaccaggtgtgaggaagtatccctgtgaactcaccctggactcaaacacagcacac
agaaaactcaaactgtctgaggacaacaggacggtgacacgtgtgagagaggaggagcag
cagccatatcctgatcatccagagaggtttgagcgctggcctcagctgatgtgcagagaa
gctctgactggtcgctgttactgggaggtcgagtggagaggagaggtttttatagcagtg
acttacagaggaatcaggaggaaaggagggggatgttggtttggaaagaatgatcagtcc
tggagtctgatctgctctgatgaagcttactctgtctatcacaataagagtgaaacacac
atctactcctcctcctacccctcctcctctcgtagagtagcagtgtatctggatcatgct
gctggctctctctccttctacagcgtctcctcctcctcactgatcctcctccacaccttc
agagccagattcactgaacctctctacgctgggtttctggtctggtcagaggactcctcc
ttagtgtgctcagtgtctctgtgtcctctgtag
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