Trematomus bernacchii (emerald rockcod): 117497231
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Entry
117497231 CDS
T09643
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117497231 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tben03029
]
117497231 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117497231 (samm50)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
117497231 (samm50)
Transporters [BR:
tben02000
]
Other transporters
Pores ion channels [TC:
1
]
117497231 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Omp85
POTRA
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
117497231
NCBI-ProteinID:
XP_034005010
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MGTVHARSLDPLPMRGPELGIHPDDIEAPEIEHEQKQEVLENKNVVVQRVHIDGLGRTKD
DLLTYEIKEVFRAKNLIDVMRKSHEARQKLLRLGIFRKVEVVIDTSRGDGALPNGLDVTF
EVTELRRMTGSYNTMVGNNEGSMVLGLKLPNVLGRAEKMNFQFSYGTKETSYGLSFFKPQ
PGNFERNITLNMYKVTGQFPWSSLRETDRGVSGEMSFPLWKTSQTLKWEGVWRELGCLAR
TASFAVREESGHSLKSSLSHSMVIDTRNSSILPRKGGLLKIHQELAGYTGGDASFLKEDF
EIQLNKTLFWDSVLSASMWGGLLLPIGDKPTSIADRFYLGGPTSIRGFSMYSLGPQSEDV
AGDYLGGEGYWAGGLHLYTPLPFRPGKGGFGDLFRTHFFLNAGNLCNLNYGEGPKAHLKK
LAECIRWSYGVGVVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgtccacgcccggagcctggaccctctgcccatgcgagggccggagctcggg
atccatcctgacgacatcgaggctcctgagatcgagcacgagcagaagcaagaagtcctt
gaaaacaagaatgttgtcgttcaacgagtccacatagatgggctcggaagaacgaaggat
gacttgttgacgtacgaaatcaaagaagttttccgggcaaagaacctgatagatgtgatg
cgaaagtcccatgaagcccgacagaagctgctgcgcctcggtatcttcagaaaagttgaa
gttgttattgacacatcgagaggtgacggtgctcttcctaacggcctcgatgtgacgttt
gaagtcaccgagctgaggcggatgaccggcagctacaacaccatggtcgggaacaatgaa
ggaagcatggtactgggcctgaagttacccaacgttttaggtcgagcagagaagatgaac
ttccagttctcctacggcaccaaagagacgtcctacggtctgtccttcttcaagccccaa
cctgggaactttgaacgaaacatcacactcaacatgtacaaagtaacgggtcagtttccc
tggagttcactgagggagacggatcgaggcgtctctggagagatgagcttccccttgtgg
aagaccagccagaccctgaagtgggagggggtgtggagggagctcggctgtctcgctcgc
accgcctccttcgccgtccgggaggagagcggccactccctcaaatcctctctctcgcac
tctatggtcatcgacacgagaaactcctccatccttcccaggaaaggcggcctgttgaag
atccatcaggaacttgctggttacaccggaggagacgccagtttcctgaaggaggacttt
gagatccagctcaacaaaacactcttctgggactcggtcctttctgcatcaatgtggggg
ggtctgctgctgcccattggggacaagccaacaagcatagcagacaggttctatctgggc
ggccccaccagcatccgagggttcagtatgtacagtctgggcccgcagagtgaagatgtg
gcaggagactacctgggaggagagggctactgggcgggggggctgcacctctacacccct
ctgcccttcaggccgggcaagggaggcttcggggatctcttcaggacgcacttcttcctc
aacgccggaaacctctgtaacctcaactatggtgaggggccaaaagctcacctgaagaaa
ctggcagaatgcatccgctggtcgtatggagtgggcgtcgtgctgcgtctggggaacatc
gccaggctggagctgaactactgcattcccatgggagtccagagcggagacaggatctgt
gatggcgtccagttcggagcaggaatccgcttcctgtga
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