Trematomus bernacchii (emerald rockcod): 117497299
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Entry
117497299 CDS
T09643
Symbol
snx1a
Name
(RefSeq) sorting nexin-1a
KO
K17917
sorting nexin-1/2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117497299 (snx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117497299 (snx1a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117497299 (snx1a)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Macropinocytosis
Sorting nexins
117497299 (snx1a)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117497299 (snx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
Motif
Other DBs
NCBI-GeneID:
117497299
NCBI-ProteinID:
XP_034005138
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MATSSERSPPPFPDSEDQDVLDTEEVGGRDSHSDEDDGDDLFMSTSNPPLTGMDSILSPT
IEPSNVLMKPPVDLMDDPLFEPVSIQTANTPSSKVMSEPSDDFVDLTNNITDSPDEEDTA
ESPVADAEEEKTEIPLDEPAEEFEDIFGSETEAPQEEVVEADVTVEETPTDKVEEASSVP
VPPVDGKTGSDEEEEAIETSTDPIIDLGADLPAVETEQPPPASQAFVDPLEDLLGDVSPA
AETQQPPPASVTFADPLVDVIIDDSPAAETQEPPRASEAFFDPLEDLFGAVSPATETQQP
PPASNTFVDPLDDLLSDDSPTSETQQPPPASKTFSDPLVDLLSAAASAAEAKIATPATVD
LFEDEGSDFFTEARQTKPAKQQKSLFGEADEDLFGEPLGATSKKAVSTEPKDKPVKTKAA
STDVSNMGGPLQDSTPAEPADLFSEEAITTVPIVKNTSAASSKTNGVHSEEEMDIFAEAT
VELSLDSPREERKKDVTVAPSTSAAPPLSAAASLVKPQAAALEELEEEEEEEQEDKFEIL
VSVKDPEKVGDGMNAYMGYKVTTQTQMPMFRNKTFTVRRRFSDFLGLYEKLSEKHGPNGF
IVPPPPEKSILGMTKVKVGKDDSSAADFVERRRAALERYLQRVVNHPSLLQDPDVREFLE
RDELPRATSTQALSGAGFLKMINKATDAVSKMTIKMNESDVWFEEKLQEVESSDQHFRKL
HALVESLVVHRKELSLNTAGFAKSTAMLGSAEDNTALSRALSQLAEVEDKMEQLHQDQAA
NDTFSFAELIADYIRLLGAVRGSFDHRMKAWQRWQDAQTALQKKRETEAKLLWANKPDKL
QLAKEEIAEWEAKVTQYERDFERVSATVRKEVVRFEKEKAKNCKREIINYLECLLQSQQQ
LIKYWEAFLPEAKAIA
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagctcggagcgtagtcctcctccgtttcccgactccgaggaccaagatgtg
ctggacaccgaagaagttggaggccgagacagtcacagtgatgaagacgacggggacgat
ctcttcatgagcacaagcaaccctccactgactggaatggacagcatactgtctcctacc
attgaacccagtaatgttttaatgaaacctcccgttgacctcatggatgaccccttattc
gagcccgtcagcatccaaacagcaaacacaccatccagcaaagtcatgagcgaaccctca
gatgattttgtcgacctaactaacaacatcaccgactctccggatgaagaagacacagct
gagagtccagttgcagatgcagaagaggaaaaaactgaaatccctttagacgagcccgca
gaggaatttgaagacatatttggaagtgaaaccgaagccccgcaagaggaagtagtagaa
gcagatgttactgttgaagaaacgccaacggataaggttgaagaggccagtagtgttcca
gttccacctgttgacgggaaaacaggaagtgatgaggaagaggaagcaatagaaacttcc
actgatcctattatcgacctcggtgctgatttgccagccgttgaaacagaacagccgcca
cctgccagccaagcatttgttgaccctttggaagaccttctcggtgatgtttcgcccgcc
gcagaaacacaacagccaccgcctgccagcgtcacatttgctgaccctttggttgatgtc
atcattgatgattccccagctgctgaaacacaagaaccaccgcgtgccagcgaagcgttc
tttgaccctttggaagaccttttcggcgctgtttcgccagccactgaaacacaacagccg
ccgcctgccagcaacacattcgttgaccctttggatgacctcctcagtgacgattcgcca
accagtgaaacacaacagccaccgcctgccagcaaaacgttcagtgaccccttggttgac
ctccttagtgctgctgcatctgctgccgaagccaaaatagccacaccggcaacagtcgat
cttttcgaagacgaggggagcgactttttcacagaagcacggcagaccaaacctgccaag
cagcagaagagcctcttcggagaagcggacgaggatctgttcggtgagccgctgggtgcc
acctcaaagaaagctgtgagcacggagccgaaggacaaacccgtcaaaaccaaagctgct
tccactgatgttagcaacatgggggggcctctgcaggacagtactcctgcagaacctgct
gatctcttcagtgaggaagccatcaccaccgtgcccattgtcaaaaacaccagcgccgcc
agctccaagaccaatggagtccactctgaagaggagatggatatatttgcagaagccaca
gtggagctttccctcgacagtccgcgggaagagagaaagaaagatgtgacagtcgcaccg
tctacgtccgccgccccccccctgtcagctgctgccagcctggtgaagccacaagctgct
gccctggaggagttggaagaagaggaagaagaagaacaggaagacaaatttgagatcttg
gtgtctgttaaagatcctgaaaaagttggtgatggaatgaacgcttacatgggctacaaa
gtaaccacacagacccaaatgccgatgttccgcaacaagacgttcaccgtgaggcgacgc
ttcagcgacttcctcggcctctacgagaagctttctgaaaaacatggaccaaatggattc
atcgtgcctccgcctccagagaagagcatcctgggaatgacaaaggtgaaggtgggaaag
gatgattcttccgcagcagactttgtggagagaagaagagctgctctggagaggtacctc
cagagggtggtaaatcacccgtcactcctccaggatcctgatgtcagagagtttctggag
agagatgagttgcccagagcaacgagcacccaggctctgagtggcgccggcttcctgaaa
atgatcaacaaagcaacagatgctgtcagtaaaatgaccatcaagatgaatgagtcagac
gtgtggttcgaggagaagctgcaggaggtggagtcttcagatcagcacttcaggaagctc
cacgcgctggtggagtctctggtggtccacaggaaagagctgtcgttgaacacggccggc
ttcgctaagagcacggcgatgctgggcagcgcggaggacaacacggctctgtcccgcgcc
ctctctcagctggccgaggtggaggacaagatggagcagctgcaccaggaccaggccgcc
aacgacaccttcagcttcgcagagctcatcgcagactacatccgcctgctgggagccgtc
agggggtcgtttgatcaccggatgaaggcgtggcagcgctggcaggacgctcagaccgct
ctgcagaagaagagagagacagaggctaagctgctgtgggcgaacaagcccgacaagctg
cagctggccaaagaggagatcgctgagtgggaggccaaggtgacgcagtacgagagggac
tttgaaagagtttctgctaccgtgcgcaaggaagtggtgcgctttgagaaggagaaggcc
aagaactgtaaaagagagatcattaattacctggagtgtctgttgcagtctcagcaacag
ctcataaagtactgggaggctttcttaccagaagccaaagctatcgcctag
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