Trematomus bernacchii (emerald rockcod): 117497450
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Entry
117497450 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: glycine--tRNA ligase-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117497450
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tben01007
]
117497450
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tben03016
]
117497450
03029 Mitochondrial biogenesis [BR:
tben03029
]
117497450
Enzymes [BR:
tben01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
117497450
Amino acid related enzymes [BR:
tben01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117497450
Transfer RNA biogenesis [BR:
tben03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117497450
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117497450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
Motif
Other DBs
NCBI-GeneID:
117497450
NCBI-ProteinID:
XP_034005330
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MDGNMEQILAPLRLAVKEQGELVRQMKQDGAPDVDVTKAVAELKARKRAFEAKELSLQPK
DDIVDRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQVWRQHFIQEEQI
LEIDCTMLTPETVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAVK
KAEMEEVTTQMDNYTQQELTDLFVKYNVKSPISGNDLTAPTLFNLMFQTSIGPGGNMTGV
KRPETAQGIFLNFKRLAGVHQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFV
DPSEKIHPKFSNVADLDLTLYSSKAQTSGQSAXIMRLGDAVEAVFFQGVINNTVLGYFIG
RIYLYLTKVGISKDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCFDLQC
HAKATKVPLVAEKPLKEPKIVNVVQFEANKGAIGKAYKKDAKIAMEYLSGCDESFITEQE
QLLTDAGEFTIESEGKSFKLTKDMVSVKRFQKTLHVEEIVPNVIEPSFGIGRVMYSIFEH
TFQVREGDDQRTYFSFPATVAPYKCSVLPLSQNQDFVPFVKQLSEAMTKNNVSYKVDDSA
GSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPDIVRDLAN
GSMTWAEVESKFPLFEGQETGKKDTVEE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggacggaaacatggagcagattctcgcccctttgaggctggctgtcaaagaacagggg
gaactggtgcgtcaaatgaaacaggatggagctcctgatgtggatgttactaaagctgtg
gctgaactgaaggcgaggaagagggcttttgaagccaaggaactgtcattacaacccaaa
gatgacatcgttgacagaaccaagatggaggacaccctcaagaggagattcttctacgac
caggcctttgccatctatggaggtgtgagcggcctgtatgacttcggccctgtcggctgc
gccctgaagaacaacatcctgcaggtgtggaggcagcacttcatccaggaggagcagatc
ctggagatcgactgcaccatgctcacccccgagaccgtcctcaagacatcaggacatgtg
gacaaatttgctgactacatggtgaaagacgtgaagaatggcgagtgcttcagggccgac
cacctcctcaaagcccacctccagaagctgatgtccgataagaagtgctcagcagttaag
aaggctgagatggaggaagtcaccactcagatggacaactacacccagcaggagctcacc
gacctctttgtgaaatacaacgtgaagtctcccatctcaggaaatgacctcacagctccc
acccttttcaacctgatgttccagacgtccatcggaccaggagggaacatgacgggggta
aaaaggcctgaaaccgctcagggaatcttcctcaacttcaagcgtctggctggagttcac
cagggaaaacttcccttcgctgctgctcaaataggaaactccttcaggaacgagatctct
cctcgctctggactcatccgtgtcagagagttcaccatggctgagatcgagcactttgtg
gatccaagtgagaaaatccaccccaaattctccaatgtagccgacctggacctcacgctc
tactcctccaaggctcagaccagcggacagtctgcanagatcatgaggctgggggacgct
gtggaggcagtgttcttccagggagtgatcaacaacaccgtcctgggatacttcatcggg
aggatctacctctacctcactaaagttggcatctccaaagacaagctgcgtttccgtcag
cacatggacaacgagatggctcactacgcctgcgactgctgggacgctgaaaccaaaacc
tcctatggctggatcgagatcgtgggatgtgccgaccgctcctgctttgatctgcaatgc
catgcgaaagctacaaaggtcccgttggtcgctgagaagcctctaaaagaacccaaaatc
gtaaacgtggtccagttcgaggccaacaaaggagccatcgggaaggcgtacaagaaggac
gccaagatcgccatggagtatctgtccgggtgtgacgagagcttcatcacagagcaggag
cagctgctcactgacgctggagagttcaccatcgagtcagaaggcaagtccttcaaactc
acgaaggacatggtgagcgtgaagcggttccagaagactctgcacgtggaggaaatagtt
cccaatgtaatcgagccctccttcggtatcggcagggtcatgtactccatctttgagcac
acgttccaggtcagagaaggtgatgatcagagaacgtacttcagcttccctgccactgta
gctccttacaaatgctccgtcctgcctctgagtcaaaaccaggatttcgtgcccttcgtg
aagcagttgtccgaggcgatgacgaagaacaacgtgtcctacaaggtggacgactctgcg
ggatccatcgggagacgctacgcccggacggatgagatcggcgtggcgttcggcatcacc
atcgacttcgacacggtgaacaagacgcctcacaccgccacgctgagagacagagactcc
atgaggcagatcagagccgaggtcagcgagttgcctgacatcgttcgagacttggccaac
ggatcaatgacctgggccgaggtggagagcaagttccccctcttcgaaggccaggagacc
ggcaagaaggacacggtcgaagagtaa
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