Trematomus bernacchii (emerald rockcod): 117497460
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Entry
117497460 CDS
T09643
Symbol
pou6f2
Name
(RefSeq) POU domain, class 6, transcription factor 2
KO
K09368
POU domain transcription factor, class 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117497460 (pou6f2)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117497460 (pou6f2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HOCHOB
FtsX_ECD
Motif
Other DBs
NCBI-GeneID:
117497460
NCBI-ProteinID:
XP_034005341
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MSPSDMSRLAWSFFSLLTAACQSPDECQSSLQDPMITGQLSKPLLSLRSDMSAAELRADD
KAATPDSDLNDEPLLLPSEATDREGTPNKLYGACDGSVQSDTSSSPSEQSHLGHSHPAFS
MGPQSLLVAQQLANAVGGVMSGAAQGMNQPILIPFNAGGHLGGQQGLVLSLPTANLQSLV
AAAAAGGLMTLPLQNLQATSTLNSQLQHLQQLQQMQQHHHQQQQQQQQQQQQQQIQQIQH
HHQQTLSHSHNALQSQHHMTPPNQQQTSIPSPGSTCSSTSGHQQHSPPHRPNHSPARSLP
SPVTPPMPLSLNPLASQVAVAAAAAAAMGSMAGSQVFGNALSNLQGATGQLVTNAQGQII
GTIPLMPNSAGPSSQSGGGNPALQVQPITPQLLTNAQGQIIATVIGNQILPVINTQGITL
SPIKPGQQMPQAQQGQTGPVSSQPSLLHMPHRQSPLHQASSSSSTSSSSSALSVGQLVSN
PQTAPSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSAAEGPAYSQSAICRHTIL
RSHFFLPQEAQENTLGSSLTGKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAEAR
HRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHFEKNTHPSGQEMTEIAEKLNYDR
EVVRVWFCNKRQALKNTVKRLKGPELGPAGAMDPLSDSLEELPK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagtccctcagatatgagtcgccttgcctggtccttcttcagcctgctgacagctgct
tgtcagagtccagatgaatgccaaagctccctccaggacccgatgattacagggcagctg
agcaagccgctgctctccctgcgcagcgacatgagcgcagcagaactccgggcggacgac
aaagcggccaccccagacagcgatctgaacgacgagcccctgctcctgccctccgaggcc
acggacagagagggcactccaaacaagctgtacggagcttgtgacggttcggtccagtct
gacaccagcagcagtccttctgagcagagtcatctgggccattcccacccagcgttctcc
atgggtccacagtctctcctggtggcccagcagctggccaatgcagtgggcggcgtgatg
tccggggcggcacagggcatgaaccagcccatcctcatccccttcaacgcaggcggacac
ctgggggggcagcagggcctcgtcctctctctgcccaccgccaacctccagagcctggtg
gctgctgctgctgcgggggggctcatgacgctcccgctccagaacctgcaagctacctca
actctgaactcccagctccaacacctgcagcagctccagcagatgcagcagcaccaccac
cagcagcagcagcagcagcaacaacaacaacaacagcaacagatccaacagatccaacac
catcaccaacagaccctctcccacagccacaacgcgctgcaatcccagcatcacatgacc
ccgcccaaccagcagcagacctccatcccgtctccaggctccacctgctcctccacctct
ggacaccagcagcactccccaccccaccggcccaaccactccccggcccgcagccttcct
tcgcccgtaaccccacccatgcctctgtcgctgaacccattggccagccaggtggcggta
gcggcggcggcagcagcagccatgggatccatggccgggtctcaagtgttcggcaacgcc
ctgtcaaacctgcaaggagccaccggacagctggtcaccaacgcacaaggacagataatt
ggaacaatcccactgatgcccaactctgcagggccctccagccaatcagggggtggcaac
ccagcactgcaggtacagccaattacacctcagcttctgaccaacgctcaaggccagatc
atcgccacggtgatcggcaatcagatcctgcctgtcatcaacacccagggaatcacgctg
tcgccaatcaagcctggacagcagatgcctcaggctcagcagggtcagacaggccctgta
tcgtctcagcccagcctgctccacatgccccacagacagagtcctctccaccaggcctct
tcctcctcctccacctcctcctcttcctcggctctcagcgtggggcagctggtcagcaac
ccgcagaccgcccccagcgaggtggacggggtcaacctggaggagatccgtgaattcgcc
aaagcattcaagatccgccgcctgtccctgggcctgactcagactcaggtgggccaggcg
ctgagcgcggccgagggtccggcgtacagccagtctgccatctgcagacacaccatcctg
agaagccactttttcctaccacaggaagcccaagagaacacattaggtagcagtctgaca
ggcaaactgaaccctggccttttatatcctgccaggtttgagaagttggacatcacccct
aaaagcgcccagaagattaagcccgttctggagcgctggatggccgaggctgaagcccgc
caccggtccggcatgcagaacctgactgagtttatcggcagcgagccttccaaaaagcgc
aagcggaggacctctttcaccccacaggcgctcgagatcctcaacagccactttgagaag
aacacacacccctccggacaggaaatgacggaaatagccgagaagctgaactatgaccgg
gaggtggtgcgggtctggttctgcaacaagagacaagctttgaaaaacacggtaaagcgt
ttgaaaggtccggagctgggcccggccggagccatggacccgctgtccgactctctagag
gagctgcccaaatga
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