Trematomus bernacchii (emerald rockcod): 117497466
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Entry
117497466 CDS
T09643
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03320
PPAR signaling pathway
tben04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117497466 (pparab)
03320 PPAR signaling pathway
117497466 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117497466 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117497466 (pparab)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117497466 (pparab)
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
117497466 (pparab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117497466
NCBI-ProteinID:
XP_034005342
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MVDMESHYHPPSPLEDSVLGSPLCADDDFLGGMEELQDISQSMDNDPLSSFDVPEYQSSS
NGSEGSTVLDALTPASSPSSIVYGVAAGQEEFSSSSSSLNLECRVCADRASGYHYGVHAC
EGCKGFFRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQS
EKLKLKAEMVTGDREVQDPQVADQKTLARQIYEAYLKNFNMNKAKARTILTGKTSTPPFV
IHDMETLQLAEQTLVAKMVGSAGPLKDREAEVRIFHCCQCTSVETVTELTEFAKSVPGFS
SLDLNDQVTLLKYGVYEALFAMLASSMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPK
FQFAMKFNAMELDDSDLALFVAVIICCGDRPGLVNVKHIERMQESIVQVLQLHLLANHPD
DSFLFPKMLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatggagagccactaccatcccccttcccccctggaggactcggtgctgggc
agccctctctgcgccgatgacgacttcctgggcggcatggaggagctccaggacatctcc
cagtccatggacaacgaccccctcagctcctttgatgtccccgaataccagtcctccagc
aatggctctgaaggttccactgttctagatgccctgacgccagcatccagcccgtcgtcc
attgtttacggggtggcagcgggccaggaagagttctcatcgtcctcctcatcgctcaat
ctggagtgtcgggtctgtgctgaccgagcctcgggctatcactacggagtccacgcctgc
gagggctgcaagggtttttttcggcggaccatccgtctgaagctggagtatgacaagtgt
gagcgccgctgcaaaatccaaaagaagaaccgcaacaagtgccaatactgccgcttccag
aagtgcctgtcggtgggcatgtcccacaacgccatccgtttcggtcggatgccgcagtca
gagaagctcaagctgaaggcggagatggtgacgggggaccgggaggtgcaggaccctcag
gtagccgaccagaagaccctggcccggcagatctacgaggcctacctcaagaacttcaac
atgaacaaggccaaggctcgaacaattctcacgggcaagaccagcacccctccttttgtc
atccatgacatggagaccctgcagttggcagagcagacgctggtggcaaagatggtgggc
tcagctggacccctgaaggacagggaggcagaagttcggattttccactgctgccagtgc
acctcggtggaaaccgtcaccgagctcacagagtttgcaaagtccgtccccgggttctcg
agcctggacctcaacgatcaggtgactcttttgaaatatggagtgtacgaggccctcttc
gccatgctcgcctccagcatgaacaaggatgggctcctggtggcgtacggctcaggcttc
atcacccgggaattcctcaagagcttgcggcggcccttcagtgacatgatggagccaaag
ttccagtttgcaatgaagtttaacgccatggagctggacgacagcgacctggctctgttt
gtggctgtcatcatctgctgtggagaccgcccaggcctggtgaacgtgaagcacatcgag
cggatgcaggagagcattgtgcaggtgcttcagctccatctgctggccaatcaccccgac
gactctttcctcttccccaagatgctgcagaaactggccgacctccggcagctggtcact
gagcacgctcagctggtacaagagattaaaaagacagaggacacgtccctgcacccgctc
ctgcaggagatctacagagacatgtactga
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