Trematomus bernacchii (emerald rockcod): 117497469
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Entry
117497469 CDS
T09643
Name
(RefSeq) transcription intermediary factor 1-alpha-like
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tben01001
]
117497469
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117497469
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117497469
Protein kinases [BR:
tben01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
117497469
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117497469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
Bromodomain
zf-RING_UBOX
PHD-1st_NSD
zf-RING_5
zf-C3HC4_2
zf-C3HC4
USP7_ICP0_bdg
PML_CC
BLOC1S3
PRANC
Motif
Other DBs
NCBI-GeneID:
117497469
NCBI-ProteinID:
XP_034005346
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MDVRTGKQEAMDAAAFTAENEAESKQVQEEKSAASGQNYLDSCPVCTLNFHSREPKLLPC
LHSFCKKCLPSPSRNLAMAETPNSQVDSATKPLNVIRCPVCRQECMEVDVMDNVFVRDSV
ETPSSTVERTVQLCMTCDDNTEAAGFCADCVEYLCATCVEAHQRVKFTKDHTIRQKAEVS
PEVHGVSTQRPVFCEIHKQEPLKLFCETCDLLTCRDCQLVKHKDHNYQFLEDAYKNHKQH
MESMTHRLQEKQKMIEEVSNSINNGLRQVHQNRTTVHNEIEKSICSLILEINKKGKMLVN
QLEAVTKDHESVLGKQQEDIGYLSRHLDHVINFTKWATARNGGTALLYCKRLILFQIGNL
LRAKCSTSFIPQSTVRFQSRSSYWALNVDLGSLLVESAPGHQLGGFQGIPHQLPHPAPGP
SGSPHSYALGAPHTTLAQLQMQVEKLNPQANWQPQPPPPPWTWYQSVRLPRTIPGPLQGG
PAPSHTMMPQPGRRFMVPPPNHISPTSSFESPGFTPQPLRGMGSSYQPKPMEVFSSPPLY
THITPLPINSGVSSPQSDQTIEPTYLNRRNDSGGPMYMLKPNYPQGLPPCFQHINVQGQQ
NSPGYAAVSQEEKPGIVTWKPPETQQASGAVGSAVKKRRRLSPGPIIVIKDEPDDDSGHL
QTHQRASLPDSTGDQPPISAPLQSTGDTPHSPSQPPSSPRDQSKTNAQNHSRTLGGEQQV
DQAPLEDSKEVLCAACGTGGELLSCDQCPRRFHLSCHVPTLLKSPSGKWFCSFCRDLLVP
EMDYDCEPEAKTVKKEPDSEGGFHPVDKRKCERLLLHLFCSKLSSDLQGPVSPPVCANNR
ETIKGPINLSALRRRLEAKQSLCYKSPAEFVSDIKLVLNQVDAEGRELGGKLKEQFEEYL
KSIFPDQTFPEIKQEMMPSAPPDSLFSSFDHKSQHAKRLRTCPDSQDAPICPSGEGGEV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacgcacaggaaaacaggaggcgatggatgctgctgccttcaccgctgagaat
gaagctgagagcaagcaggtgcaggaggaaaagtccgctgcatccgggcagaattacctg
gactcatgccccgtttgcactttaaactttcacagccgagagcccaaacttcttccgtgt
ctgcactctttttgtaagaaatgtctcccttcgccctcgaggaatttggccatggcagag
acgccaaactcccaggtggacagcgcgaccaaaccactgaatgtgatccgctgtccggtg
tgcagacaggagtgtatggaggtagatgtgatggacaacgtgtttgtgagggactcagtt
gagactcccagcagcacagtggagaggacagtccagctctgtatgacatgtgatgacaac
actgaagcggctgggttttgtgcggactgcgttgaatacctctgtgccacctgtgtggag
gcccaccaaagggtcaaattcaccaaagaccacaccatcagacagaaggcagaagtatcg
ccagaagtccatggggtgtcgactcagaggccggtgttctgtgagatccacaagcaggag
ccgctgaagctcttctgtgagacctgcgacctgctgacctgtcgtgactgccagctggtc
aagcacaaggaccacaattaccagttccttgaagatgcttataaaaaccataaacagcac
atggagagcatgacccatcggctgcaggagaaacagaaaatgattgaagaggtatccaac
tccataaacaatggactccgacaggttcatcagaaccgtacgactgttcataatgaaata
gagaaatctatctgcagtttgattcttgagataaacaagaagggcaagatgctagttaat
caacttgaggctgtaacaaaggatcatgagagtgtcctaggaaaacaacaggaggacatc
ggctatctttccagacacctggatcatgtcatcaacttcaccaaatgggccacagccagg
aatgggggcacagccctgttgtactgtaaacgtttgattctgtttcagattggaaacctc
ctgcgggcaaaatgtagtacctcgtttataccacagagcactgtgcgcttccagagccga
tcctcttattgggccttgaatgtagatctgggctctttactggtggagagtgcaccaggc
caccagctgggcggttttcagggtatccctcatcagctcccccaccctgcgccgggcccc
tcaggctcaccccacagctacgccctgggagcaccccatactactctggctcagctccaa
atgcaggtggagaagctaaacccgcaggccaactggcagccccaaccacctcctccaccc
tggacgtggtaccagagtgtccgacttccgcgaaccatccctgggcccctgcaaggaggc
cccgccccctcccacactatgatgccccaaccaggccgcaggttcatggtgccccctccc
aaccacatcagcccaactagcagctttgaaagccctgggtttaccccccagcctctgagg
gggatgggaagcagctaccaacccaaacccatggaagtcttctcctctccacctctctac
acccatattacaccactgcccatcaatagtggcgtcagctcgcctcaatcagatcagacg
attgagcctacatatctgaataggaggaatgattcaggcggtccgatgtacatgctgaaa
ccaaactatccccagggcttgcctccatgttttcaacacataaatgtgcaaggacagcag
aattcaccagggtacgctgctgtttcccaggaggagaaaccaggcattgttacctggaaa
cctccagaaacacagcaggccagtggagcagtaggctcagctgtcaagaagagaagaagg
ttatcaccagggcccatcatagtcatcaaagatgagccagatgatgacagtggccacctc
caaacccatcaaagagccagccttcctgacagcacaggtgaccaacccccaatcagtgct
cctcttcaaagcacaggtgacacaccccatagtccttcccagcctccaagcagcccgcgg
gaccagagtaagactaatgctcaaaatcacagccgtaccctgggaggagaacagcaggta
gaccaagccccactggaggactctaaagaggtcctgtgtgctgcgtgtgggacaggcgga
gagctgctgagctgtgatcagtgtcccaggaggtttcacctttcctgccatgttccaact
ctcctcaaatctcccagtgggaaatggttttgctcattctgccgtgatctgttagtgcca
gagatggattatgactgcgaacctgaagccaaaacagtgaagaaggagccagattctgaa
ggaggatttcaccctgtggacaaacgaaagtgtgagaggctgttgctgcacttgttttgc
agcaagctgagttcagaccttcaaggccctgtatcccccccggtatgtgctaataacagg
gagactataaagggaccgattaatctttccgctctgagaagacgactggaagcaaagcag
agtctgtgctacaaaagccctgcagagtttgtgtcggacatcaagcttgtcctcaatcag
gtggacgcagagggcagggagctgggcggaaagcttaaagagcagtttgaggaatacctg
aagagcatcttccctgaccagacctttccagaaatcaaacaggagatgatgccttctgct
cctcctgactctcttttctcatcttttgaccacaaatcccagcatgcaaagcgcttgcgc
acatgtccagactcccaggatgcaccgatctgtcccagtggagaggggggagaagtatga
DBGET
integrated database retrieval system
