Trematomus bernacchii (emerald rockcod): 117497697
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Entry
117497697 CDS
T09643
Symbol
slc1a6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117497697 (slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117497697 (slc1a6)
Transporters [BR:
tben02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
117497697 (slc1a6)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
117497697
NCBI-ProteinID:
XP_034005593
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MSEKPPNSASLFLNEDTDKPPLPERGDLRRRLRRAMEKRGSSVKEKMSSISRDNVKGFLK
RNLFVLFTVAAVALGVLLGFALRPHNLSLREIKYFSFPGELLMRMLKMLVLPLIVSSLVT
GISSLDSKASGKMGMRAVVYYTVTTLIAVFIGIVIVVIIQPGRGSRDSPVSKSGNIEPIQ
ATDAFLDLIRNMFPPNLVEACFLQYKTVYKKTVHIRNVTVSLNLTESLNLTESDLNVNLS
RVLHTIQETVVETVPMSSSSSGVNALGLVVFSMCFGLVIGSMKQQGQALRDFFTCLNEAI
MRLVSIIIWYAPVGIMFLISGKIVEMKDLAEMGGQLGMYTVSVIVGLLIHGLFVLPLLYF
LVTRKNPYVFIGGILQALITALGTSSSSATLPITFRCLEENNRVDKRVTRFVLPVGATIN
MDGTALYEAVAAIFIAQVNDMDLNFGQILTISITATAASIGAAGIPQAGLVTMVIVLTSV
GLPTEDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRKELQSQDAEVCNSVIEENE
KPYQLICQENDSLNHRNSETTM
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaagccccccaacagtgccagtcttttcctgaacgaggacacggacaaaccc
ccactccccgagagaggagacttgaggagacgcctccgcagagccatggagaagagaggc
agcagcgtgaaggagaagatgagctccatcagcagggacaacgtaaagggtttcctcaag
aggaacctgttcgtcctgttcactgtggccgccgtcgctctgggtgtactcttgggattc
gctcttcgcccccacaacctgtccctgagggagatcaagtacttctcgttccccggggag
ctgctgatgaggatgctgaagatgctggtgcttcctctcatcgtctccagtctggtcaca
ggtatttcctctctggacagcaaggcctcaggtaagatggggatgcgagcggtggtctac
tacacggtgaccactctgatcgcggtgttcatcggcatcgtcatcgtggtcatcatccag
ccggggagaggcagccgggacagtcctgtgtccaagagcgggaacatcgagccgatccag
gccacggacgccttcctggatctcatcaggaacatgttccctccaaatctggtagaggct
tgtttccttcagtataaaacagtgtataagaagacggtgcacatcaggaacgtgacggtg
tctctgaacctcaccgagtctctgaacctcacagagtcggacctgaacgtgaacctcagc
cgggttctgcacacaattcaggagacggtggtggagacggtgccgatgtccagctcctcc
agtggagtgaacgctctgggtctggtggtgttctccatgtgcttcgggctggtgatcggc
agcatgaagcagcagggccaggctctcagggacttcttcacctgtctgaacgaagccatc
atgaggctggtgtccatcatcatctggtacgctccggtcggcatcatgttcctgatttcg
gggaagatcgtggagatgaaggacctggcggagatgggggggcagctggggatgtacacc
gtgtccgtcatcgtgggtctgctcatccacggcctcttcgttctgccgctgctctacttc
ctggtgacaaggaagaacccctacgtcttcatcggagggattctgcaggcgctcatcacc
gctctgggaacatcgtccagctctgccaccctgccgatcactttccgttgtctggaggaa
aacaaccgtgtggacaaacgagtgactcgcttcgtccttcccgtcggcgccaccatcaac
atggacggcaccgcgctgtacgaggcggtggcggccatctttatcgcccaggtcaacgac
atggacctcaactttgggcagattctcaccatcagcatcacggcaacggctgccagcatc
ggagcagcaggcatccctcaggctggactggttaccatggtgatcgtattgacctcggtg
ggactgcccacggaggacataactctgatcatcgccgtggattggttcctggaccgcctg
cgcaccaccaccaacgtgctgggtgactctctgggtgcggggatcgtggagcatctttcc
cgtaaagagctgcagagtcaggacgccgaagtgtgcaactctgtgatcgaggagaacgag
aagccctaccagctcatctgtcaggagaacgactcactcaaccaccgcaacagtgagacc
acgatgtga
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