Trematomus bernacchii (emerald rockcod): 117497732
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Entry
117497732 CDS
T09643
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117497732
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117497732
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
RR_TM4-6
Zip
NLP40
EMC3_TMCO1
AAA_27
YjcZ
PFF1_TM
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
117497732
NCBI-ProteinID:
XP_034005631
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MAKTGSERKLFSSRQRLSNPDDELAVIENGESRASLCEDISERALSSDSHRNSFTGSGAI
ARLSYFFFMLWNWASHRVHPEVERRDSFLDRFRGPELKETSRESNAQSLGSCDVARKRNL
AIKWPLATYNMNNCNNTDNKKEEKKEEIKKDDEKKDGDKKDDEKKDGDKKDDEKKDEKKD
EKKDEKKDEKKDDKKDDKKDEKKKEEPPKDTWMMDPASDLYYRWLTVIACPVFYNLMMIV
TRSCFNELQDTYTNLWIFLDYGADIIYFGDTFVRSRTGYLEQGLLVKDSKKLRDKYKTTP
QFKYDMITMIPTDLLFLKFGYNNPEFRFNRLCKMTRLFEFFERTETRTSFPNMFRISNLV
LYILTIIHWNACMFFAISKTIGFGTDTWVYPNISHPEYGRLARKYIYSLYWSTLTLTTIG
ETPAPVRDVEFLFVISDFLTGVLIFASIVGNVGAMISNMNASRAEFQAKIDSIKQYMQFR
KVSKDLEGRVIKWFDYLWTEKKTCDEKEVLKNLPDKLKAEIAINVHLDTLKKVRIFQGCE
AGLLIELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGAYF
GEISILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLVESLTEYPEAKKALEEKGKAILM
KDNLIDEAIANAGADPKDLEEKIEKLQTNLDSMQGKFAQLMAEFTSTQSRMKQRVTQMEA
KVKSIQPQDLAEVEADKDKKVQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaccggcagtgagagaaagcttttctcctccagacagcggctgtccaaccct
gatgacgagctcgctgtcatcgaaaatggagaaagcagggcttctctgtgtgaagatatc
tctgagagagcgctgtcttcagattctcacagaaactccttcacaggatccggggcgata
gccaggctctcttacttcttcttcatgctgtggaactgggcgtctcacagagttcacccc
gaggtggagcgacgcgactcattcctcgaccgcttcaggggccccgagctcaaagagacg
tcgagagaaagcaacgctcagtctttggggtcctgtgacgtcgcccgcaagaggaatctt
gccattaagtggccgctagctacttacaacatgaataactgcaacaacacagacaacaaa
aaagaggaaaaaaaggaggagattaaaaaggacgacgagaagaaagacggagacaagaag
gacgacgagaagaaagacggagacaagaaggacgacgagaagaaagacgagaagaaagac
gagaagaaagacgagaagaaagacgagaagaaggatgataagaaggatgataagaaggat
gagaagaagaaagaagagccaccgaaagatacctggatgatggatccagcctcagacttg
tactacaggtggctcacagtcatcgcatgcccagtattttacaacctgatgatgattgta
acaagatcctgctttaatgagctccaggacacgtacacaaacctctggatcttcttggac
tacggcgctgatatcatctactttggggatacgtttgtcagatcgagaacaggttacctg
gagcaaggcctgctggtgaaagactcgaagaaactgcgagacaaatacaaaacgacgcct
cagttcaaatacgacatgattaccatgatacccactgatctgctgtttctcaaattcgga
tacaacaacccggagttcagattcaaccgcctctgcaaaatgacgaggctttttgagttc
ttcgagaggactgaaacaagaaccagcttcccgaacatgttccgtatcagcaacctcgta
ctttacatcctgaccatcatccactggaacgcttgcatgttcttcgccatctcgaaaact
attgggtttggaaccgacacgtgggtttatcccaatatcagccacccggagtacggacgc
ttggccaggaagtacatctactcgctgtactggtccacgctgacactcacaaccatcgga
gagaccccagcgcccgtgagggacgtcgaattcctcttcgtcatctcagacttcctcacc
ggtgtgctgatcttcgctagtatcgtcggtaacgtcggtgccatgatctccaacatgaac
gcgtctcgcgccgaattccaggcgaagatcgactccattaagcagtacatgcagtttcga
aaggtcagcaaagacctcgagggaagagtcatcaagtggttcgactacctgtggacggag
aagaagacctgcgacgagaaggaagtcttgaagaacctgccggacaaactgaaggccgag
atcgccatcaacgtgcatttggacacgctgaagaaagtgcgaattttccagggttgcgaa
gctggcttgctgattgagttggtgctcaagctgcagccacaagtgttcagccctggagat
tacatctgcaagaagggcgatatcggcagggagatgtacatcattaaggaggggaagctg
gctgtggtggcggacgacggcgtcacgcagttcgttgtgctcagcgatggtgcctacttc
ggagaaatcagtatcttagggatcaagggaagtaaagccgggaacaggagaacggctaac
atccgaagcgttggctactcggatctcttcgcgctgtccaaagacgacttagtggagtct
ctcactgagtaccccgaagccaaaaaggctctggaggaaaaaggtaaagccatcctgatg
aaagacaacctgatcgacgaggccatcgccaacgccggcgccgatcccaaagacctggag
gagaagatcgagaaactgcagaccaacttggattcaatgcagggaaagttcgcccagttg
atggcagagtttacctccactcaatccaggatgaagcagagggtcacccagatggaggcc
aaggtgaaatccatacaaccccaagacctggccgaggtagaggccgacaaggacaaaaag
gtccagtaa
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integrated database retrieval system
