Trematomus bernacchii (emerald rockcod): 117497753
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Entry
117497753 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117497753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117497753
Membrane trafficking [BR:
tben04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117497753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
117497753
NCBI-ProteinID:
XP_034005655
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MADSPLNHSWPSFSKLWMKRWSFKRASECKPCIAPCGSPSASLSVPPQAPFGTGSXPPHC
PPPSIAEDAFFGSSTKDKDACSVVSDYDCPCAELSSSVEDLLDLSYSLKDSEYFKDLEGG
IPASFTASTERNPLPLGLQVSLNTDTKQPTHTSLSTHSHRVNAPSSPFYIHPAEESHRNF
VVTQLRPKLHPGCIIDSDESSGPAVGLSLTINLNGLLGSMETAKGITGSQEEKEQGGVDL
DGELDEDSFPILVRSMSTSRRHSLGVPMSPITLGRRLSLDTMATDSDGEREEDEEEEEGL
KGFFQSQQQQTYGSGPGEETDDCSLSVPCPRARVTSMACGVPRRHLYSRSEILATDECSR
AAHISRVVQTSKQAARAAGAEEFDPEENLHSTDGQSHMLMVQKVLQELKLYYRAKQKVTG
SVTWYEFLSNANDEEEDRTEKVEKGTKVKRTLSSLRNRVTGSFNKDKGKNREKEHQKEKE
KEKDTVYGSRRCHGHHLVPGSFSSCATCSLCSKTLQRKHGLQCMNCAVNVHKSCKSLLGE
CTSSRNKRDSHPRIGSSGSPNPALKHRDRELTGLDGHPGSLGTPGMTISPWGNSTHTHTH
SSTAASNASLRHHNSSGSLPGEMDETDALRSKRCNEDAISLAPSTTESIIVEDAHYAAVR
ADLESDAQDLEAESWSSAVDQPFVKKHPKQMVKRQDVIYELMQTEMHHVRTLKIMLRVYV
RELKENLQMDSGKLDCLFPRLENLLELHTHFLSRLKERRRENLTSPNERNYSINRVADVL
ITQFSGEVGGRMKESYGDFCSHHTEAVSYYKEQLHNNKKFQNIIRKVNNLSIVRRLGVSE
CILLVTQRIMKYPVLVERIILNTEAGTEEHEELTRALGLIKDTIVQVDTLVNVHEKNSRL
QDIHNKMEPKALGKIKDDRVFRREDLAQGRRRLLHEGTVNWKAASGRLKDILAVLLSDVL
LLLQEKDQRYVFATVDNKPPVISLQKLIVREVAHEEKAMFLICASSNEPEMYEIHTASKE
ERNTWMAHIRQAVESCPHTEERLFSEEEEARASRFKEFQERLSQKDSVVVQALTEKLQLF
ADMSESVAGLEDTAARSRLLLRGDASDLQQGEALLKGAITEVENLQNLLQSGVREESPTS
RLEEGSGSGVLPRRADTFGGYDSSPSILNKNGSVKKNFSGESRNRDRRASSDPQLKDLCG
SHTLEQTVDESCCSPARWNRIWSNSFPEAEFFDKVLMLSQRLYSLQAIIAQQDSHMELQR
ASLTERASLSGRHRGNVLLEQEKQRTLALQREELASFHKLQSQHRQEQQRWERERERHRQ
QVEATEARLRLREDECRRLEELLAEERRELESQRGTYQQDLERLRESTRSVEKEKERLEH
QKKIKRKTIEVAPLSGSLNGELLMSSSLTSSSLSVLDQPIPQKPLVRGSLSVAPADYAER
PEVMLRREASASALPLKTEVPLHLFSTTNQQHKLLGVQQQIPTKLAAFSSGKGKGGKIGK
ASHRTDSSASVDMKQMLPLKLSARDDNALKAKRSVSPNQQSASPLPPPLHHHSDPLSPPD
SGPDSSISSPHPPNVQKPPLPPSMQHSQPPSMSPHSQSTVCLQPPVLSPNAQVQVNVHGL
SHSHSMPPPYKMAPEDHNKEDVIFF
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atggcggactctcctctcaaccactcctggccctccttctccaaactctggatgaagaga
tggtccttcaagagagcgtcagagtgtaaaccatgcattgcaccctgtgggtctccaagt
gcctctctcagtgtcccgcctcaggcccccttcgggacggggtccnntcctcctcactgc
ccccccccctccatcgctgaagatgccttctttgggagctccacaaaagacaaggatgcg
tgttcagtagtgagcgactacgactgcccctgtgctgagttgagcagcagtgtggaggac
ctgctggacctcagctattctctcaaagactcagagtactttaaagacctggagggaggg
ataccggcttcttttactgcatccacagagagaaaccccctacctctcggcctgcaggtg
tctctaaacacagacaccaaacagcctacacacacttctctgagcacacattctcatcga
gtcaatgcaccatcttcccccttctacatccaccctgcagaggagtcacatcggaacttt
gtggtcactcagttgaggccgaagttacacccaggctgcatcattgacagcgatgagtcc
tcgggtcctgcagtaggactgagcctgaccattaatctgaacggactgctggggtcgatg
gagacggctaaagggataacgggatcgcaggaggagaaggagcagggcggtgtggattta
gatggagagctggacgaggacagcttccctattctggtccggtccatgtccacgtctcgg
aggcacagcttgggggtccccatgtcccccattaccttggggaggaggctgagtctggac
accatggccacggacagtgatggagagagagaggaagatgaggaagaggaggaaggactg
aaaggtttcttccagtcccaacagcagcaaacatacggctcgggtcctggagaggagacg
gacgactgcagtctgagtgtcccctgtcccagagccagagtcaccagcatggcctgtgga
gttccccgcagacatctgtactcccgctcagagatcttggccacggacgagtgttcccgc
gccgctcacatctcccgtgttgtgcagacgtccaaacaggcagccagggcggcaggagca
gaggagttcgaccctgaagaaaacctgcactctactgacggccagagccacatgctgatg
gtacagaaagttctgcaggagctgaagctgtactacagagcgaagcagaaagttacagga
agtgtaacctggtacgagttcctctccaatgcgaatgacgaagaggaggatcgtacagag
aaggtggagaaaggcacgaaggtgaagaggactctcagctctctgaggaacagagtgact
ggctccttcaataaagataagggtaagaaccgagagaaggaacatcagaaggagaaggag
aaggagaaagacacagtgtatggcagcaggaggtgtcacggccatcatctggtgccgggg
tctttctccagctgtgccacctgctctctgtgcagcaagaccctgcagaggaagcatggc
ctgcagtgcatgaattgtgctgtgaacgttcacaagagctgcaagtctctgctgggtgag
tgcaccagcagcaggaacaagagagattctcacccgaggattggctcgtcaggatctcct
aatcctgcgctgaagcaccgggacagagagctaacgggcctggatggccacccgggttct
ctcggcaccccaggcatgaccatcagtccgtggggaaacagcactcacactcacacccac
agctccacagcagcatccaacgctagcctccgtcaccacaacagctcaggatccctcccc
ggggagatggatgagacggatgctctccgctccaaacgctgcaacgaagacgccatttcc
ctcgctccctccaccaccgagtccatcatcgtcgaagatgctcactatgcagcagtgcgg
gctgatctggagtcagatgctcaggacctggaggcagagtcgtggagttcggcagtggac
cagccttttgtgaagaagcaccccaaacaaatggtgaagagacaggatgtgatatacgag
ctgatgcagacggagatgcaccacgtgcggacgctgaagatcatgctgcgtgtttacgtc
cgggagctgaaggagaacctgcagatggattctgggaagctggactgtctgttcccccgc
ctggagaacctcctcgagcttcacacacacttcctgtctcgcctcaaagagcggcggcga
gagaacctcacttcgcccaacgagaggaactactccatcaacagggtggccgacgttctg
atcacacagttctcaggtgaggtgggggggaggatgaaggaaagctatggagatttctgc
agtcaccacaccgaggctgtcagctactacaaagaacagctgcacaacaacaaaaagttc
caaaacatcattcggaaagtcaacaacctgtccattgtgcggaggttaggagtgtccgag
tgcatcctgttggtgacgcagcgcatcatgaagtacccggtactagtggagcgcattatc
ctcaacactgaagcgggaacagaggagcacgaggagctgacccgggctctgggtctgatc
aaagacaccatcgttcaggtggacacgctggttaatgtccacgagaagaactctcgactg
caagacattcacaacaagatggagccaaaggcgctggggaagatcaaagatgaccgagtg
tttcgcagggaggacctggctcagggccgcaggaggctgctgcacgagggcaccgtcaac
tggaaggctgcctctggacgcctcaaagatattcttgcagtgctgctgtcagatgtgttg
ctcttgctacaagagaaggatcagagatatgtatttgctacagtggacaacaagccgcca
gtgatctcccttcagaagctgatcgtcagggaggtggcccacgaggagaaagccatgttt
ctgatctgcgcctcctccaatgagcccgagatgtacgagatccacaccgcctccaaggag
gagcgcaacacctggatggcccacatccggcaggctgtggagagttgtcctcacacagaa
gagaggctgttcagcgaggaggaagaggctcgagcttccaggttcaaagaatttcaagag
cgtctgagccagaaggactctgtggtggtgcaggcgctcactgagaagctgcagctgttt
gcagacatgtcggagtctgtggccggtctggaggacacggctgcacgctccagactcctg
ctgagaggagacgcctcagacctccagcagggggaggccctgctcaaaggagccatcact
gaggtggagaacctccagaacctgctgcagtccggagtgagggaggagtctcccacctcc
aggctggaggaggggagcggctcgggggtcctgccccggcgggccgacaccttcgggggc
tacgacagcagccccagcatcctcaataagaatggcagcgtgaagaagaacttttctggc
gagagcagaaacagagacaggagagccagctctgaccctcagctcaaagacctctgtggc
agccacaccctggagcagacggttgatgagagttgctgctctcctgccagatggaaccgc
atctggtccaactccttccccgaggccgagttctttgacaaagtgctgatgctctcccaa
agactctacagtctgcaggccatcatcgcgcagcaggacagccacatggagctgcagcga
gcctctctgacggagcgcgcctctctgtccgggcgccacagagggaacgtgctgctggag
caggagaagcagcgcaccctcgccctgcagagggaggagctggccagcttccacaagctg
cagtctcagcaccggcaggagcagcagcgctgggagagggagcgggagaggcaccggcag
caggtggaggccaccgaggcccggctgaggctcagggaggatgagtgccgacggctggag
gagctcctggcggaggagaggagggagctggagagccagagggggacgtaccagcaggac
ctggagcggctcagagagtccaccaggtctgtggagaaggagaaggagcgcctggagcac
cagaagaagatcaagaggaagaccatcgaggtggcccctctgtcaggcagtctgaacgga
gagctcctcatgtcctccagcctcacctcctcctccctcagcgtcctggaccagccgatc
ccccagaagcccctggtgcggggcagcctgtccgtggcgccggcagactacgcagagcgg
cccgaggtgatgctgcggagggaggccagtgcgtccgccctgcctctgaagaccgaggtg
ccgctccacctgttcagcaccaccaaccagcagcacaaactgctgggggtgcagcagcag
atccccaccaagctggccgccttcagcagcggcaaggggaagggagggaagatcgggaag
gcctcgcatcgcaccgacagcagcgcctcagtggatatgaagcagatgctccccctgaag
ctgtccgcccgagacgacaacgccctgaaggccaaacgctccgtcagccccaaccagcag
tctgcctccccgctgcctccacccctgcatcaccactcagatcctctcagtcctccagac
agcggaccagactcctccatcagctccccccaccctcccaatgtccagaagccccccctg
cctcccagcatgcaacactcccagcctcccagcatgtccccccactcccagagcacagtc
tgcctccagccgccggtcctcagcccaaacgcccaggtccaggtgaacgttcacgggctc
tcacacagccacagcatgccccccccctacaagatggcccccgaggaccacaacaaggag
gacgtcatcttcttctag
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integrated database retrieval system
