KEGG   Trematomus bernacchii (emerald rockcod): 117497814
Entry
117497814         CDS       T09643                                 
Name
(RefSeq) LOW QUALITY PROTEIN: helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tben03400]
    117497814
Enzymes [BR:tben01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     117497814
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    117497814
SSDB
Motif
Pfam: DEAD ResIII DEXQc_Suv3
Other DBs
NCBI-GeneID: 117497814
NCBI-ProteinID: XP_034005721
LinkDB
Position
Unknown
AA seq 575 aa
MSRKEHIREQTARTPAVVMNSAEKRDIRIKRVSSRKRSRDSSQMTPERKRGPEKCPPICR
LSSIMAEQQQQPAAELFCSDSEDLFGDYDSLLQDSSLLDRLDDAEQSERQRDVQRDVQRD
FTNLRTKTDEDVLTDSILDAMGEEDLPPSMQQFKDQVQETRVRLQGGDQTSTPLRNTKTS
TPLRTKEESRPPRGGGGRGGGGGGGSSRRRSVADALKKTMLCNAASPAMASRSAALKEAV
LSEEISVAMQALEEVSEEKTPDLGPFFGLPSRVKELMLRLKGIQSLYEWQETCLNLPSVQ
RRKNLIYSLPTSGGKTLVAEILILRELLCRKKDALFILPYVSLVQEKVRGLASFGVELDF
LVEEYAGSKGRFPPVKRKDRRSLYVATIEKAHSLVNSLIENQRIDDLGLVVVDELHMLGD
GSRGAIIEMTLAKVLYTAKSTQIIGMSATLGNIKDLQTFLRAENYSNDFRPVQLKEYVKL
QDTIYEVDPKEEDCFKFSRLLNFKYSSSMQKLDPDHIIAMVTEVIPKHSCLVFCPTKKNC
ENVGALICRYLRKDFLLLHEQQKLLLLSQLERCVV
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgtcgcggaaggaacacatcagagaacaaactgccaggacaccagctgttgtgatgaat
tctgctgagaaacgagacatcagaatcaaacgggtctcgtccaggaagagatctcgcgat
agctcacagatgacacctgagaggaagagaggacctgagaaatgtcctccgatctgcagg
ctgagcagcatcatggcagaacaacaacaacaacctgctgcagagttgttctgcagcgac
agcgaggatctgttcggggattacgacagcctcctgcaggacagctcgctgctcgacaga
ctggacgacgctgagcagagcgagaggcagagagacgtccagagagacgtccagagagac
ttcaccaacctgaggacgaagacagacgaagacgtgctcacagactccatcctggacgcc
atgggagaggaagatcttcctcccagcatgcaacagttcaaggatcaggtccaggagacg
agggtccgtctgcagggcggagatcagacctccactccgctcagaaacacaaagacctcc
acccctctgaggactaaagaggagagtagacccccgagaggaggaggaggaagaggagga
ggaggaggaggaggatcatcgaggaggaggagcgtggcggacgctctgaagaagacgatg
ctttgtaacgcagcctctccagccatggcgtctcgcagcgcagcgttaaaggaggccgtc
ctctcggaggaaatctccgtcgccatgcaggcgttggaggaagtttctgaagagaagacc
cccgacctcgggcccttcttcgggctcccgtccagagtcaaggagctgatgctgcggctg
aaggggatccagagcttatacgagtggcaggagacgtgtctgaacctgccgtccgttcag
cgccggaagaacctgatctactcgctgccgaccagcggaggaaagactctggtggccgag
atcctgatcctcagagagctgctctgcaggaagaaggacgctctgttcatcctgccgtac
gtctctctggtgcaggagaaggtgcgagggttggcgagcttcggcgtggagctggacttc
ctggtggaggagtacgccggcagtaaaggaaggttcccccccgtaaagaggaaagacagg
aggtctctttacgtcgcgacgatagaaaaagcccacagcctcgtgaactcgctgatcgag
aaccagaggatcgacgacctggggctggtggtggtggacgagcttcacatgttgggcgac
ggcagcagaggagcgatcattgagatgacgctcgctaaagttctctacacggccaaatcc
actcagattatcgggatgagcgccacgctgggaaacattaaagacctgcagacgttttta
agagcagaaaactacagcaatgacttccggcctgtgcagctgaaggagtacgttaaactg
caagacaccatctatgaagtagacccaaaggaggaggactgcttcaaattctctcgtctc
ctcaacttcaagtactccagctccatgcagaagctggacccggaccacatcatcgccatg
gtgaccgaagtcatcccaaaacactcctgtctggttttctgccccacgaagaagaactgt
gagaatgtgggagcgctgatctgcagatacctcaggaaggacttcctgctcctccacgag
cagcagaagctcctcctcctctcccagctggagaggtgtgtagtgtga

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