Trematomus bernacchii (emerald rockcod): 117497815
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Entry
117497815 CDS
T09643
Symbol
hpse
Name
(RefSeq) heparanase isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00531
Glycosaminoglycan degradation
tben01100
Metabolic pathways
Module
tben_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117497815 (hpse)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117497815 (hpse)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
117497815 (hpse)
Glycosaminoglycan binding proteins [BR:
tben00536
]
Heparan sulfate / Heparin
Enzymes
117497815 (hpse)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
117497815
NCBI-ProteinID:
XP_034005722
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MESVQLLVLVLMWNQSSGSLLQNQTKTRFPPLLPPTQTRFSHPVLPVLLHVSSVFRRVER
RFLSVTIDSSLASEEKFMSLLGSPKVRTLAKALSPAFLRFGGTRQDFMEFSPTRRGSSSS
AEKSCSARLLPSWLEQRLKKEWSRQQILLKREDLHRKYKRVKFTEYTVDMLHSFSNCSGL
DLIFGLNALLRTSENIWNGSNARSLLQYCESRGYQMDWELGNEPNSYEKKAGVRVDGFQL
GKDFALLREMMSESKLYRHAGLYGPDVGQPRNHRTDILQGFLQSGAGVVDACTWHHYYVN
GRDTSLEDFLDPDILDTLTLKTLEVLEKVKQASPEKPVWLGETSSAFGGGAAGLSDTFVA
GFMWLDKLGLSALLGLDLVMRQVFIGSGSYHLIDQNLDPLPDFWLSVLYKRLVGPEVLKV
EFSGLARSKRVRLYLHCANTRSFSRGAVTLISLNLGPRTLSISSHLFSSGSVEAFVLESG
QPGEEGLISRSVKLNGKMLLMPDDETLPDLTGTRLPPAERLQIPAFSLGFFVLKEARAAA
CR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgttcagctgctggttctggttctgatgtggaaccagtcctccggatctctc
cttcagaaccaaacaaagacccggttcccccccctcttaccaccgacccagacccggttc
tcccacccggttctgccggttctgctgcatgtctcctcggtgtttcggcgggtggagcgg
cgcttcctgtccgtcaccatcgactccagcctggcttcagaggagaagttcatgtcgctg
ctgggctctccaaaggtccggactctggctaaagctctgagtccagcgttcctccggttc
gggggaacgagacaagacttcatggagttcagcccgacccgccggggctcttcttcctct
gcagagaagtcctgctctgcccggctgctgccctcctggctggagcagcgtctgaagaag
gagtggagccgacaacaaatcctcctgaagagggaagatctgcacaggaagtacaagagg
gtcaagttcacagagtacacggtggacatgctgcactccttctctaactgctccggtctg
gatctgatcttcgggctgaacgctctcctcagaacctcagagaacatctggaacggcagc
aacgctcgatctctgctgcagtactgcgagtccagagggtaccagatggactgggagctg
ggcaacgagcccaacagctatgagaagaaggcgggggtgcgcgtggatgggtttcagctg
ggaaaggacttcgcccttctcagagagatgatgtcagagtcaaaactttatcgacacgcc
gggctttacggtcctgacgttggtcagcctcgaaatcaccggaccgacatcctgcagggg
ttcctgcagagtggagcgggggtggtggacgcctgcacctggcaccattactatgtgaac
ggcagggacacgtctctggaggatttcctggacccagatatcctggacactctgacctta
aagacactagaagtcctggagaaagtgaagcaggcgtctccagagaagcccgtgtggctc
ggagagacgagctctgcgttcggaggaggagccgccggtctgtcggacaccttcgtcgcc
ggattcatgtggttggataaactgggtctcagtgctcttctgggtctggacctggtgatg
cgtcaggtgttcatcggctccggcagctaccacctgatcgaccagaacctggaccctctc
cctgacttctggctctccgtcctctacaagcgtctcgtgggtccggaggtcctgaaagta
gaattctctggtctggctcgcagtaagagagtcaggctgtacctgcactgtgccaacaca
cgcagtttcagccgtggagcagtgactctgatttctctgaacctcggcccccggacgctc
tctatctcctcccatctcttctcctccggatcagtggaggcgtttgttctggagtcgggg
cagccgggggaggaggggcttatctccaggtccgtgaagctgaacggaaagatgcttctg
atgcctgacgatgaaactcttccagatctcacaggaactcgtcttcctccagctgagcgt
ctgcagattcctgctttctcgctcggcttcttcgtcctgaaggaagctcgcgccgccgcc
tgccgctga
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