Trematomus bernacchii (emerald rockcod): 117498005
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Entry
117498005 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC117498005
KO
K06727
Fc receptor-like protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tben04090
]
117498005
CD molecules [BR:
tben04090
]
Proteins
117498005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
V-set
I-set
Ig_4
Ig_5
DUF4064
Syndecan
Mid2
Motif
Other DBs
NCBI-GeneID:
117498005
NCBI-ProteinID:
XP_034005942
LinkDB
All DBs
Position
Unknown
AA seq
1323 aa
AA seq
DB search
MGHTLLSLLGFFLLNLLYRGQAQDAVLTIEPNRTTFFIGESVTFKCDITGDKDSDWSYSI
HWNGGGFLSYHKHESFKLPSATGYSGEYQCFFHQNGSTKESNTIYLTVSDRIVILESPAS
TLFEGESVTLRCRHRTQREENVAFYRDGSLITTDRNHQSPIMAKHTVQVMSDGSSYSCKF
GDEESEPIKLRTEPTPKAQLRDIFPGGGNVTLTCSVGPSSASGWRYFWYKKENTSEPLKT
QDVFLTNDRISVSRGGVYWCRGGRGNPVYYTEYSDAVVTNRAVVTLRPNWPEIYSGETIT
LTCEIKDGGDSEWDYIWMTPGSETPLTSEPKYTLTSQSGDYGCMGRLKGDMSSTQWSDVL
TLKVSDNTPEPVLTVSPSWPSPGASVTLNCRVDHLSAGWSFYWYKAVPQKSGYSYSYELL
PGSHTGTEQHLFIIDGQTHTAGYVCRAGRGDPVFYSGQSEPKFIWSGDLNSAASLTVSPD
SVQHFTKTPVSLSCEGNSTEWRVMMLSESDKLYRCSSLGTMTGSTCTITRYWLSGVYWCD
SETGQFSNAVNITVRSLYGEIILLSPVRPVAEGRSVTLSCKLKTQTVYNVDFYKNDKLIQ
NDTRRELTISAVSKSDEGFYKCKQRDSADGWTSPESWFSVKSSMHGEASEFPILLIVGLL
CGVLLIILLLLFLYLYRKSKDSCYSRSQRTNQGPATDHMINQDETNQREYASVLQDNACL
YETIKGPEEPANDESTDVTYSVLELKNISKKGKKNEPEDCVYSHVQMASAAGKSSPAPAD
ETVYSELKPGTGLGKNAAVKVDVCVRDRESVFDVKMGHTLLCALGLFLLNTRLQCCDAED
ALTLKTNWSTLYTGETVTLACDKSDGQDTDWSYTFTRNNSKLDFCKTKKSSCSFKLTKND
NGQYQCSVFQTKTNSTNQSNIVRLTVLDNPKPALNVSRSWLSPGASVTLNCSVTDSAAGW
RFYWYKAVANLSINSNYSFELLPGKSNGTENNTYVVNGQIHTAGYVCRAGRGNPVHYSWY
SKPKFVWSGDSHAPSVKVSPDRVQHFSSDPVSLSCEGNQSRVVRFTEAGHLSNCSDWGRK
NGSTWIIKNLTNKTAVYWCEFASGEFSNAVNITIGLQSDVILVSPVHPVTEGDSVRLSCK
VKSGSLSFNVSFFRNNTLQNYTSAELRISAVSKSDEGFYMCRYAEKKSAQSWLSVKSASS
PGKMNRSSILLLIIGLVCGIVVFIFLLLFCCCMKSKDSSFARTTLFQRTNQGFAPDQLVN
LNEIQPQHPSSHLHDESGDVTYSSIHLKDIRKTENSSAAEETVYSEVKLDKAPGNNVTCI
FFI
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgggacacactttgctctctctgctggggtttttcttgctgaatttactttaccgtgga
caagctcaagatgctgtgctgaccattgagccaaaccggaccacttttttcatcggagag
tctgttaccttcaagtgtgacattacaggagacaaagacagcgactggtcttactcaatc
cactggaatggtggaggatttctctcttaccacaaacatgagagctttaaattaccctca
gctacaggctacagtggtgaataccaatgtttttttcatcagaacggctcaacaaaggaa
agcaatacaatctatctaactgtatcagatagaatcgtgatcctggaaagtcctgcgtcc
actttgtttgaaggagaatcagtgactctgcgctgtaggcatcgtactcagagagaggag
aatgttgccttctacagagacggatcattgatcacaacagacagaaaccaccagtcacca
ataatggcaaaacacactgttcaagtaatgtcagacgggagctcttacagttgtaaattt
ggcgatgaagaatctgaaccaataaaactgagaactgaaccaacaccaaaggcccagctg
agagacatatttccaggagggggcaatgtgactctaacttgctctgtaggaccatcatca
gcttctggttggagatacttctggtacaaaaaagagaacacctctgaacccctgaagaca
caagatgttttcctcacaaatgaccgaatcagtgtctcacgaggaggcgtctactggtgc
agaggaggaagaggaaaccctgtttactacacagagtacagcgatgcagtcgtcacaaac
agggctgttgtgaccctgcgacccaactggcctgagatttactctggagaaactatcact
cttacatgtgaaattaaggatggaggagactctgagtgggattatatatggatgacaccc
gggtcagaaacacctctgacatctgaacctaaatatactctgacctcacaaagtggagac
tacgggtgtatgggcagactgaaaggtgacatgtcttcaacccagtggagtgatgtcctc
acattgaaagtatctgacaacacacctgagcctgtcctcactgtgtctccatcatggccg
agtcctggagcctcagtaactctgaactgcagggttgatcatctttctgctggctggagc
ttctactggtataaggctgttccccaaaagtcaggctactcctacagctatgagctgcta
cctggcagccacacagggactgaacagcatctcttcatcattgatggacaaacacacaca
gcaggatatgtgtgcagagcaggaagaggagatccagtgttttacagtgggcagagtgaa
cctaaatttatctggtctggagatttgaattcagcagcgtctctcacagtgagtcctgac
agtgtgcagcacttcaccaaaacgcctgtgtctctgagctgtgagggaaactccactgag
tggagagtgatgatgctatcggaatctgacaagctttatcgatgttcttccttggggaca
atgactggatccacatgcacaataaccagatactggcttagtggagtgtactggtgtgac
tctgaaacaggacagttcagtaatgcagtcaacatcactgtgaggtcactatatggtgaa
attatcctgctgagtcctgtccgtcctgtggctgagggacgttctgtcactcttagctgc
aagttaaagacacaaactgtttataatgtggatttctataaaaatgacaaactcatccag
aacgataccagaagggagctgaccatctctgcagtgtcaaagtcagatgaaggcttttat
aaatgtaaacagagagattcagcagatggttggacgtcaccagagagttggttctcagta
aaatcgtccatgcatggagaagcctctgaatttcccattctgctgatcgttgggctgctt
tgtggagttttactgattattctcctgctgctgttcctgtatttatacagaaagtcaaaa
gattcatgctatagcagatctcagaggaccaatcagggccctgctacagaccacatgatc
aaccaggacgaaactaaccaaagagaatatgcttctgttcttcaggataatgcctgtctc
tatgaaacaatcaaaggccctgaagaacctgcaaatgatgaatccacggatgtgacatat
tctgtgctcgagctcaaaaacatttctaagaaggggaagaaaaatgaaccggaggattgt
gtttactcacatgtgcagatggcatcagctgcagggaagtcaagtcctgcaccagcggat
gaaactgtttattctgaactcaaaccaggaacaggtcttggtaaaaatgcagctgttaaa
gtggacgtatgtgtgagagacagagagtcagtgttcgatgtgaagatgggacacactttg
ctctgcgcgctggggttattcttgctgaacacacgtctacaatgctgtgacgctgaagat
gctttgactctaaagaccaactggtccactttatacacgggggaaactgttacgctcgca
tgtgacaaaagtgacggccaagacactgactggagttacaccttcaccaggaacaattca
aaactcgatttctgcaaaacaaagaagtcttcttgctcattcaagttaacgaaaaacgac
aatggccaataccagtgcagtgtttttcaaacaaagacaaattctacaaatcagagtaat
atagtccgtctgactgtattagataatccaaaacctgctctcaatgtgtctcgttcatgg
ctgagtcctggagcctccgtcactctgaactgcagtgttacagattcagcagcagggtgg
aggttttactggtataaggccgttgccaatctgtctatcaactccaactacagctttgag
ctactacccggcaagagcaatgggactgaaaacaatacctacgttgttaatggacagata
cacacagcagggtatgtgtgcagggctggaagaggaaaccctgtgcattactcttggtat
agcaaaccaaagtttgtctggtcaggagattctcatgcaccatcagtcaaagtgagtcct
gacagagtgcagcacttttcctcagatcctgtgtcactgagctgtgaggggaaccagtca
agagtggtgaggttcactgaagcaggccatctgtcaaactgctctgactgggggagaaag
aacggatctacatggatcatcaaaaatctgacaaacaaaacagcggtgtactggtgtgag
tttgcatctggtgaattcagcaatgcagtcaacattactataggcctacaaagtgatgtt
atcctggtgagccctgtccatcctgtgactgaaggagattctgttcgtcttagttgcaaa
gtgaagagcggatcattatcttttaatgtttctttctttcgaaataatactctccaaaat
tataccagtgctgagctgaggatctctgcagtgtcaaagtcagacgaaggcttctacatg
tgtcgatacgcagaaaaaaagtcagcacagagttggttgtcagtaaaatcagcatccagt
cctggaaaaatgaacagatcatctattctgctactgatcattgggttggtttgtgggatt
gttgtgttcattttcctgctgctattctgttgctgcatgaagtccaaagattcaagcttt
gcaaggaccacactgtttcagagaaccaatcagggctttgctccagatcaactggttaat
ctgaacgaaattcaaccgcagcatccttcctctcatctccacgatgaatccggcgatgtc
acttactcttcgattcaccttaaagacattagaaagaccgaaaactcctctgctgcagaa
gaaacggtttattctgaagtgaaactagacaaagctcctggtaataatgttacatgcatc
ttctttatttaa
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