Trematomus bernacchii (emerald rockcod): 117498006
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Entry
117498006 CDS
T09643
Name
(RefSeq) uncharacterized protein LOC117498006
KO
K06727
Fc receptor-like protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tben04090
]
117498006
CD molecules [BR:
tben04090
]
Proteins
117498006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
V-set
Ig_5
Ig_4
Syndecan
Motif
Other DBs
NCBI-GeneID:
117498006
NCBI-ProteinID:
XP_034005943
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MGHTLLSLLGFFLLNLLYRGQAQDAVLTIEPNLTTFSPWESVTFKCDITGGKENDWFYSI
QRDGQAFLSYQKYESYKLPSASGYSGEYQCFFLHRGSTKISNKIYLNVSERPEPVLTVSP
SWPSPGASVTLNCRVDHPSAGWSFYWYKAVPRLSGNSYSYELLPGSKNGTEQDLFIIDGQ
AHTAIYYCRAGIGYPVYYSSYSKPKFVWSGDINSAASLTVSPDSVQHFTKTSVSLSCEGN
STEWRVMRLYESGFLHHCSSWGTMTGSTCTMTRYWFSGVYWCESETGQFSNAVNITIEYG
DIILVSPVRPVAEGLPVTLSCKLNNEAAVYYVDFYKNDKVIQNDTRRELTISAVSKSDEG
FYKCKQRDSADGWTSPESWFSVKSASGHGKDSQFPVLLIVGLLCGVLLIILLLLFLYSYR
KSKDSCYSRSQRTNHGPATDHMINQDETNQREYASVLQDNACLYETIKGPEEPANDESMD
VTYSVVELKHISKKGKKNEPEDCVYSHVQMASAAGKSSPAPADETVYSELKPGTALGKNA
AVKVDVCVRDRESVFDVKMGHTLLCALGLFLLNLLYRVQAQDAVLTIEPNWTTVFIGESV
TFKCDITGDKDRDWSYSIQRDGREFLSYQKHESFKLPSLASGYSGEYQCFFRYRGSKKRS
NKIYLTVSDKPLPVLTVSPSWPSPGASVTLNCRVDHPSAGWSFYWFKAVPKKSDNSYSYE
LLPGSENGTEHHLFIIDGQTHTAGYVCIAGRGDPVFYTSYTKPTFFWSGDINSVASLTVS
PDSVQHFTETSVSLSCEGNSTEWRVMKFSQPDNLLLPCSIWGTMTGSTCTITRRWLSGVF
WCESETGQFSNAVNITKDDDDIILVSPVRPVAEGLPATLSCKLKTETVYNADFYKNDKLI
QNDTRRELTISAVSKSDEGFYKCKQRDSADGWTSPESWFSVKYRNVILESPASTLFEGES
VTLRCRHRNQREENAAFYRDRSLMANNTVQVMSDGSSFSCKFGDEESESIKLRTEPKPKA
QLRDVFPGGGNVTLTCSVGPSSASGWRYFWYKKEKTSEPLKTQDVVFLTNDQISVSRGGV
YWCRGGRGNPVYYTEYSDAVVTNRAVVTLRPNWPEIYSGETITLTCEIKDGGDYEWDYIW
TTLGSYKPPTSDPKYTLTSQSGDYGCMGRLKGEMSATLWSDVLTLTVSNDKPLPVLTVSP
SWPSPGASVTLNCRVDHPSAGWSFYWYKAVPKKSGNSYSHELLPGSENGTEHHLFIIDGQ
THTAGYVCRAGRGDPVFYSWHSSAAFLWSGDLNSAASLTVSPDSVQHFTETSVSLSCEGN
STEWRVRSFWKPAYLYPCSSWGTMTGSTCTITSSWLSGVFWCESETGQFSNAVNITMEYD
GKMILVSPVRPVAEGHAVTLSCKLKTGTVYNVDFYKNDKLIQNDTRSELTISAVSKSDEG
FYKCKQRDSADGWMSPESWFSVKSASRPGKVSQFPVLLTVGLLCGVLRIILPLLFMYRYR
KSKDSVFIRSQSTNQGPATDHMINQDEIQNMPQYSTLLHGDRCLYETIGAPVEAGNDSVF
IRSQSTNQGPATDHMINQDEIQNMPEYSALLHGDRCLYGRIGGPVEAGNDSVFIRSQSTN
QGPATDHMINQDEIQNMPEYSALLHGDRCLYGRIGGPVEAGNAGASNEPEESLYINVAAD
Q
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgggacacactttgctctctctactggggtttttcttgctgaatttactttaccgtgga
caagctcaagatgctgtgctgaccattgagccaaacttgaccactttttccccctgggag
tctgttaccttcaagtgtgacattacaggaggcaaagaaaacgactggttttactcaatc
caaagggatggtcaagcatttctctcgtaccaaaaatatgagagctataaattaccctca
gcttcaggctacagtggtgaatatcaatgcttttttctgcacaggggatcaacaaaaata
agcaataaaatctatctaaatgtatcagaaagacctgagcctgtcctcactgtgtctcca
tcatggccgagtcctggagcctcagtaactctgaactgcagggttgatcatccttctgct
ggctggagcttctactggtataaggctgttcccagactgtcaggcaactcctacagctat
gagctgctacctggcagcaagaatgggactgaacaggatctcttcatcattgatggacaa
gcacacacagcaatatattactgcagagcaggaataggatatccagtgtattacagttcg
tacagcaaacctaagtttgtctggtctggagatattaactctgcagcgtctctcacagtg
agtcctgacagtgtgcagcacttcaccaaaacgtctgtgtcactgagctgtgagggaaac
tccactgagtggagagtgatgaggttgtatgaatctggcttccttcatcactgttcttcc
tgggggacaatgactggatccacatgcacaatgaccagatactggtttagtggagtgtac
tggtgtgagtctgaaacaggacagttcagtaatgcagtcaacatcactattgagtatggt
gatattatcctggtgagtcctgtccgtcctgtggctgagggacttcctgtcactcttagc
tgcaagttaaataatgaagctgctgtttattatgtggatttctataaaaatgacaaagtc
atccagaacgataccagaagggagctgaccatctctgcagtgtcaaagtcagatgaaggc
ttttataaatgtaaacagagagattcagcagatggttggacatcaccagagagttggttc
tcagtaaaatcagcgtccgggcatggaaaagactctcaatttcccgttctgctgatcgtt
gggctgctttgtggagttttactgattattctcctgctgctgttcctgtattcatacaga
aagtcaaaagattcatgctatagcagatctcagaggaccaatcacggccctgctacagac
cacatgatcaaccaggacgaaactaaccaaagagaatatgcttctgttctccaggataat
gcttgtctctatgaaacaatcaaaggcccagaagaacctgcaaatgatgaatccatggat
gtcacatattctgtggtcgagctcaaacacatttctaagaaggggaagaaaaatgaaccg
gaggattgtgtttactcacatgtgcagatggcatcagctgcagggaagtcaagtcctgca
ccagcggatgaaactgtttattctgaactcaaaccaggaacagctcttggtaaaaatgca
gctgttaaagtggacgtatgtgtgagagacagagagtcagtgttcgatgtgaagatggga
cacactttgctctgcgcactggggttattcttgctgaatttactctaccgtgtacaagct
caagatgctgtgctgaccattgagccaaactggaccactgtttttattggagagtctgtt
actttcaagtgtgacatcacaggagacaaagacagagactggtcttactcaatccaaagg
gatggtcgagaatttctctcttaccaaaaacatgagagctttaaattaccctctctagct
tcaggctacagtggtgaataccaatgtttttttcggtacaggggatcaaagaaaagaagc
aataaaatctatctaactgtatcagacaaacctctgcctgtcctcactgtgtctccatca
tggccgagtcctggagcctcagtaactctgaactgcagggttgatcatccttctgctggc
tggagcttctactggtttaaggctgttcccaaaaagtcagacaactcctacagctatgag
ctgctacctggcagcgagaatgggactgaacaccatctcttcatcattgatggacaaaca
cacacagcaggatatgtgtgcatagcaggaaggggagatccagtgttttacacttcatac
accaaacctacgtttttctggtctggagatattaattcagtagcgtctctcacagtgagt
cctgacagtgtgcagcacttcaccgaaacgtctgtgtcactgagctgtgagggaaactcc
actgagtggagagtgatgaagttttcacaacctgacaaccttcttcttccctgttctatc
tgggggacaatgactggatccacatgcacaataaccagaagatggcttagtggagtgttc
tggtgtgagtctgaaacaggacagttcagtaatgcagtcaacatcactaaagatgatgat
gatattatcctggtgagccctgtccgacctgtagccgagggacttcctgccactcttagc
tgcaagttaaagacagaaaccgtttataatgcggatttctataaaaatgacaaactcatc
cagaatgataccagaagggagctgaccatctctgcagtgtcaaagtcagatgaaggcttt
tataaatgtaaacagagagattcagcagatggttggacgtcaccagagagttggttctca
gtaaaatacagaaacgtgatcctggaaagtcctgcgtccactttgtttgaaggagaatca
gtgactctgcgctgtaggcatcgtaatcagagagaggagaatgctgccttctacagagac
agatcattaatggcaaacaacacagttcaagtaatgtcagacgggagctctttcagttgt
aaatttggcgatgaagaatctgaatcaataaaactgagaactgaaccaaaaccaaaggcc
cagctgagagacgtatttccaggagggggcaatgtgactctaacttgctctgtaggacca
tcatcagcttctggttggagatacttctggtacaaaaaagagaaaacctctgaacccctg
aagacacaggatgtggttttcctcacaaatgatcaaatcagtgtctcacgaggaggcgtc
tactggtgcagaggaggaagaggaaaccctgtttactacacagagtacagcgatgcagtc
gtcacaaacagggctgttgtgaccctgcgacccaactggcctgagatttactctggagaa
acgatcactcttacatgtgaaattaaggatggaggagactatgagtgggattatatatgg
acgacactcgggtcatacaaacctccgacatctgaccctaaatatactctgacctcacaa
agtggagactacgggtgtatgggcagactgaaaggtgaaatgtctgccacgctgtggagt
gatgttctcacattgacagtatctaatgacaaacctctgcctgtcctcactgtgtctcca
tcatggccgagtcctggagcctcagtaactctgaactgcagggttgatcatccttctgct
ggctggagcttctactggtataaggctgttcccaaaaagtcaggcaactcttacagccat
gagctgctacctggcagcgagaatgggactgaacaccatctcttcatcattgatggacaa
acacacacagcaggatatgtgtgcagagcaggaagaggagatccagtgttttacagttgg
catagcagtgctgcatttctctggtctggagatttgaattcagcagcatctctcacagtg
agtcctgacagtgtgcagcacttcaccgaaacgtctgtgtcactgagctgtgagggaaac
tccactgagtggagagtgaggagcttttggaaacctgcctacctttatccctgttcttcc
tgggggacaatgactggatccacatgcacaataaccagcagctggctcagtggagtgttc
tggtgtgagtctgaaacaggacagttcagtaatgcagtcaacatcactatggagtatgat
ggtaaaatgatcctggtgagtcctgtccgtcctgtggctgagggacatgctgtcactctt
agctgcaagttaaagacaggaaccgtttataatgtggatttctataaaaatgacaaactc
atccagaacgataccagaagcgagctgaccatctctgcagtgtcaaagtcagacgaaggc
ttttataaatgtaaacagagagattcagcagatggttggatgtcaccagagagttggttc
tcagtaaaatcagcttctcggcctggaaaagtctctcaatttcccgtcctgttgactgtt
gggctgctttgtggagttttacggataattctccctctgctgttcatgtatcgctacaga
aaatcaaaagattcagtcttcatcagatctcagagcaccaatcagggccctgctacagac
cacatgatcaaccaggatgaaattcaaaacatgccacaatattctactctcctccatggt
gatcgttgtctctatgaaacaatcggagcgcctgtagaagctggaaatgattcagtcttc
atcagatctcagagcaccaatcagggccctgctacagaccacatgatcaaccaggatgaa
attcaaaacatgccagaatattctgctctcctccatggtgatcgttgtctctatggaaga
atcggagggccggtagaagctggaaatgattcagtcttcatcagatctcagagcaccaat
cagggccctgctacagaccacatgatcaaccaggatgaaattcaaaacatgccagaatat
tctgctctcctccatggtgatcgttgtctctatggaagaatcggagggcctgtagaagct
ggaaatgcaggtgccagtaatgaaccagaagagagcctttacataaacgtggctgcagat
caataa
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