Trematomus bernacchii (emerald rockcod): 117498089
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Entry
117498089 CDS
T09643
Name
(RefSeq) collagen alpha-1(X) chain-like isoform X1
KO
K23284
C1q-related factor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117498089
Membrane trafficking [BR:
tben04131
]
Endocytosis
Phagocytosis
Opsonins
117498089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1q
Exonuc_VII_L
Tropomyosin
MscS_porin
PPC
V-SNARE_C
TNF
DUF7310
BclA_C
Crescentin
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
117498089
NCBI-ProteinID:
XP_034006048
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MRLTIVLIVSLFSGLILAQEGDNVSEKLKAMETRLVNSETRLVNSETRLVNTETRLMDTE
NKLKDTENRLKDTENRLKDTDNRLMGTDNRLMGTDNRLKESENQILELKNKENKTVIFSA
ATGGGGNAIGPFNTDTTLIYRTLITNIGAAYSPSTGIFTAPVPGVYYFTIFYHARWSYGT
HLRIYKNNELMIWTQDNSSTSDTADNGGNAVFLQLVQGDQVYVQLAASTHVWGSDHHTTF
SGFLVTEM
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaccattgtgctgattgtgtcgctgtttagtggcttaattttggcccaggaa
ggtgataatgtaagtgagaaactaaaggctatggaaaccagactggtgaacagtgaaacc
agactggtgaacagtgaaaccagactggtgaacactgaaaccagactgatggacactgaa
aacaagctgaaggacactgaaaacaggctgaaggacactgaaaacaggctgaaggacact
gataacaggctgatgggcactgataacaggctgatgggcactgataacagactgaaggag
agtgaaaaccagattcttgaactgaagaacaaagaaaataagacggtcatattcagtgca
gcaacaggaggaggagggaatgccattggacccttcaacacagacacaactttaatctac
agaaccttgatcacaaatattggagccgcctacagtccatccacaggtatctttactgcc
ccggttccaggtgtttattactttaccatcttctatcatgctagatggagctatggcact
cacttacggatctacaagaacaatgaattgatgatatggacacaagataactcttcaacc
tctgacacagctgataatggaggaaacgcagtgttcctgcagcttgttcaaggagaccag
gtgtacgtgcagctggctgcaagcacgcatgtttggggaagcgaccatcatacaaccttc
agtggttttctggtcactgaaatgtga
DBGET
integrated database retrieval system
