Trematomus bernacchii (emerald rockcod): 117498121
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Entry
117498121 CDS
T09643
Symbol
arhgef40
Name
(RefSeq) pleckstrin homology domain-containing family G member 4B
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117498121 (arhgef40)
Membrane trafficking [BR:
tben04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117498121 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
DHC_N2
KIAA1755_C
Motif
Other DBs
NCBI-GeneID:
117498121
NCBI-ProteinID:
XP_034006095
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MGSEAMEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFVPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRILRSNDFYLQVVPFSTRCPRLA
LKCLAHGGRTVQEILVPESQHPLVFTTEWLHSINKERGHKREVGGGLDTCLVSTCDGVVR
LPWKEVVYPKFIHDPSEELMSNLEGPKTKRLPSEGGSSLGGWGGSSSGELDSWSWDEEED
DGVDSEPARPRRRRSEDGLGRTARHPQLDGDYVELMEPRLGPDGGVDTRQRYLEMHGINK
TKTLPLCRRSKAIKLRKGRAWGYGRLEGSGSFRAAKRDLVTPKGDSLPRRTSPGVTEPCR
SRRSYSSSVLDSDEGDKTSRDSEGLESNRLYHDGLFKERRPGVGKERDSNSLPQPCRNSG
KDSESGESFVANDLANDKVGHVIEGHSDHGSHSHSVFEDTDKPLSADSDATTPTSDATER
SFSGILESRETNKSGSKVTSSSNPKVTEGRDDGKMEDSVSPRGKEVKTAGFRAPRRKRKG
KGAKGRARSGGRSHHKGSKQQGKAALPSPNNCSALTKLPIVDENKSEQRKPTDEPSTDKG
TGDRRKSSAEKEAQSLPICNGQSGTPSLNHSNEEAASGDTSPDQINGVTFKEPPLLRELE
KELLQSGKLKLTGTLDRLGRALVVTETDASDESFSEEDMARVLACYYRITRPAAKEKGLT
VLMDGRRSPPSAPCLSALKLFQVLVPGGLGSVLVLVDEQQQESLSYNVEGAEVHMVRGTA
VLQQHIDRQQLPTEMDGDFSHCHSDWLAFRLSLESLTERCEGALALLGEALQSMDTEPMP
KDIKAVPQSIDKHRQLMASVLADQRLTEPQQRGGAWLAGLTNSATGLAQKSPDCRTALAA
TAKLYDSVDDALHQLVQTSNQRGRDLEALGRLAGLVDKLEKCDKEIEQVQSQLEDYKDPP
LSLSRLSLKQQKFKTFRETANDLHSETLSVLSDLEGWCELDWTGLSAVQIRLPPVREKLR
DMSHVLSDCWTTLDNTQRLLSTLTEATQWCEVVYSNSSSPSSTCPLASLPPIPPSRFQDA
RSLAIELGGGALLELWTQTVERYQRTVAQVKPRFLQPDRAQNQNPGRPKTPSASSLWDLM
GPEGEGDWGLGAGGGDGGLQSWGSLASLFRPQTCSTLKIGEDKGTKKDGTSGGGASGAGG
GKFLQNLLNPAKKSPTESTLPPKPPRKRHPSFDLQALLAPRRGAGTPKPEYPVGGPSRNS
PMSWLGRRAVADPVIATSMAAAIPGWAAGGFGSGGGGVLIRGVEVSSKEVVDHTGSPRQH
VLLGRTERETGTDRAGTTPQSKLYLLWCRMLSSERQYVAVLKGVEETYLPLLALSDTPAS
IRGKADTLLPNWASLSNFHSQSLLPAMEGALVQSLLQQDCFSKYREQFLQYSHYIRTKPE
LDSPLVTQAADFFKSKLPPASPLSPLSYPHCLQAPSQRLEQYCEALEELGGINPASDSAL
SILRHAQRHGEDLRASDLIVGCPIPVAERGDLVRQGELTVVCGGARRKRAGVRNVFLYQH
VVIFTKQKSAGPGRTAFSCKHSIKTGEMGLTQSVGGDGLKFEVWVRQAPRTKDCITLQAK
DREGKVAWTQDIAHLLWTHAINNTELCLKESLCMGISSKLLLDATGTPGSELDSIYSLND
RVHSSCSDSSSVGSQKEGGSPASGRDPRGSSGSTSCSQSHSPSTAV
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggaggcgatggaggactgtgtgcagggggcgctctcatcgctgtaccctcct
tttgagagcaccgcaccacccctcctctcccaggtcttttcagtcctggagtcgacctat
caacacgacagtcttcgctacctcctggactatttcgttcccgccaagcacctcctgcac
aaactccagcagcacgcctgttctcagtacctgggctgcttgttcctgcactccggctgg
cctctgtgtctaggcgagaaagtggttgtgcagctatccacgttggactggaggatcctg
cgcagtaatgacttctacctgcaggtggtgcccttctctacacgctgtccacggctggcc
ctaaaatgtctggctcatgggggacgcaccgttcaggaaatattggtacccgagtcgcag
caccctcttgtgttcacaactgagtggctgcacagcatcaacaaagaacgaggtcacaaa
agagaagttggaggaggacttgacacctgcctggtcagtacgtgtgacggtgtggttcga
cttccgtggaaggaggtcgtttacccaaaattcatccacgacccgtctgaggagctgatg
tccaaccttgaggggccaaagaccaagcgcctgcccagtgaggggggcagcagtcttggg
ggctggggtggctcatcctccggagaactggactcctggtcctgggacgaggaagaagat
gacggcgtggactctgaacctgcgcgtcccaggcgaaggcgcagcgaggacgggctcggg
cggacagcgaggcaccctcagctggacggggactatgtggagctgatggagcccagactg
ggtcctgatggaggggttgacacaaggcaaagatacctcgagatgcacggaattaataag
acaaagacattgccgttgtgccggagaagtaaagccatcaaactcaggaagggaagagcg
tggggatacgggagacttgaagggtcaggaagctttcgagctgccaaaagagatctagtt
accccaaaaggggacagtttaccacgtcggacttcaccaggagtcaccgaaccttgcaga
agcagacggtcttactcctcttctgtccttgactcagatgaaggagataaaacaagtaga
gactctgaaggcctggaaagcaaccggctatatcatgacggcctgttcaaagagaggagg
cccggtgtggggaaagagagagacagcaacagcctcccacagccgtgcagaaacagcggt
aaagactcagagagtggcgagagttttgtcgcaaatgacttggcaaatgacaaagttggg
catgtcatcgagggtcactcggatcacggatctcattctcactctgttttcgaggataca
gataaaccactgagcgcagacagcgatgccaccaccccgacatcagacgcaacagaaaga
tcattcagtggaattttagaaagtagagaaactaacaaaagtggatccaaggtgacaagt
tcatccaacccaaaggtgacagagggaagggatgacggaaagatggaggacagtgtcagt
cccagaggaaaggaagttaaaactgcaggattcagagcaccaaggaggaagaggaagggt
aagggggccaaagggagggctaggtctggtggtcgttcacaccacaagggatcaaaacag
cagggcaaagctgctctaccaagtcctaacaactgctctgctttaactaaactgccaatc
gtagacgagaacaaatctgagcaaagaaaaccgacagacgaaccatcaaccgacaagggg
acgggcgacagaaggaaaagcagtgcagagaaagaagcccaatctttgcctatctgcaac
ggccaatccggcacaccctcactcaaccactctaatgaggaggcggcgtcaggagacaca
agtcctgaccaaataaacggtgttacatttaaagagcctcctctgctcagggaactggaa
aaagagcttctccagtcagggaagctgaagttgacaggtacactggacaggttgggacgc
gctctggttgtcacggagacagatgcatcagatgagagcttctctgaggaggacatggcc
cgagtcctggcctgctattacagaatcactcggcctgcagccaaagaaaagggcctcaca
gtgttaatggacggcagacgctctccaccctccgccccctgcctctctgctcttaaattg
ttccaggtgttggttcctggcggtcttggatctgttctggttttggtggatgagcagcag
caggagtccctttcgtataacgtggaaggcgctgaggtccacatggtgcgaggaacagcg
gtccttcagcaacatatagacaggcagcagctgcccacagagatggatggagacttcagc
cattgtcactcagactggctggccttcagactaagcctggagagtctgacggagcgttgt
gagggcgccctggctctcctcggcgaagctctgcagtctatggacacggagccaatgcca
aaagacatcaaggctgttcctcagagcatcgacaaacacagacagctgatggcgagcgtg
ctggccgaccagcgattaactgaacctcagcaaaggggaggggcctggctcgcaggactg
accaatagcgcaacaggactggcacagaagtcacctgactgcaggactgctcttgctgcg
accgctaaactctacgacagcgtggatgacgccctccatcagctcgtacaaacgtccaac
caaagaggtcgcgatcttgaagctctgggacgactagccggcctcgtggacaaactggaa
aagtgtgataaggagattgagcaagtccagtcacagttggaggactacaaggaccctcct
ctgtctctcagcagactctccctcaaacagcagaagttcaagacattcagagaaacagcc
aacgatctgcacagcgagactctgtcggtgctcagcgatctggagggctggtgcgagctg
gactggaccggcctgagcgccgtccagatccgacttcctccggtcagggagaagctgaga
gacatgtcccacgttctgtctgactgctggacgaccctggacaacactcagaggctgctg
tccacgctgaccgaggccactcagtggtgcgaggtggtctactccaactcctcctcccca
tcttccacctgccctctcgcctcccttcctccgatccccccgtcccgtttccaggatgct
cgttccttagccatagagctgggcggcggggcgctcctggagctctggacgcagacggtg
gagcgctaccagcggaccgtagcgcaggttaaaccgcgcttcctccagcctgaccgggcc
cagaatcagaacccggggaggccaaagaccccctccgccagcagcctgtgggacctgatg
ggtcccgagggagagggcgactggggattgggagccggaggaggcgacggggggcttcag
tcctggggatccctggcgtcgctgttcagaccgcagacctgctccacgctgaagatagga
gaggacaaagggacgaagaaggatgggacaagtggaggaggagctagcggagctggggga
gggaagttcctgcagaaccttctgaatccagcaaagaagagtcctacggagtccacgctc
cctccaaagccccccaggaagcgccacccaagctttgacctccaggctcttctggccccc
cgcagaggcgcaggaaccccaaaaccagagtacccggttggagggccgagccgaaactcc
cccatgtcctggctggggagacgggcggttgccgacccggtgatcgccaccagtatggct
gcagctatccctggatgggccgctggaggttttggaagtggaggaggaggggtgttaatt
cgaggggtggaggtcagcagcaaggaggtggtggaccacacggggtcgccacgacaacac
gttctgctcgggaggacggagagagaaacggggacagatagagccggaacgactccacag
agtaagctgtacctgctctggtgcaggatgctgagttcagagaggcagtatgtggccgtc
ctgaagggggtagaagagacgtacctcccattactggcactctcagacacccccgcctcc
atcagagggaaggcagacactctcttacctaactgggccagcctcagcaactttcactcg
cagagcctactccctgccatggagggcgctctagtgcagagcctgctgcaacaggactgc
ttcagcaaatatcgggagcagtttctgcagtattcacattacatcaggactaaaccagag
ctggactctcctctggtcacacaggctgctgacttctttaagtccaaactcccccctgcc
tcccccctctcccccctgtcctaccctcactgtctgcaggctccctctcagaggctggag
cagtactgcgaggccctggaggagctgggagggataaaccccgcctccgactccgccctc
tccatcctgagacacgcccagcggcacggcgaggacctgagggccagcgacctcatcgtg
ggatgtccgattccggtggcggagcgaggtgatttggtgcggcagggcgagctgacggtg
gtgtgcgggggggctcggaggaagcgtgcgggcgtgaggaacgtcttcctctaccagcac
gtcgtcatcttcaccaaacagaagagcgccggcccgggacgcaccgccttcagctgcaag
cacagcatcaagaccggtgagatgggtctgactcagagcgtggggggggacgggctgaag
tttgaagtgtgggtgcgtcaggctcctcgaaccaaagactgcatcacgctgcaggccaag
gacagggaaggaaaagtggcctggactcaagacatcgcccacctgctgtggactcacgcc
atcaacaacacagagttgtgtctgaaggagtcgctctgcatggggatttccagtaagctg
ctgctggacgcgacaggaacacctggatctgaactggactccatctacagtctcaatgac
agagtccatagtagctgctcagactcctcctctgtgggcagtcagaaggagggggggtcc
ccggcgtctgggagggaccccaggggaagctccggatcaacaagttgctcccagagccac
tctccctctacagctgtgtaa
DBGET
integrated database retrieval system
