Trematomus bernacchii (emerald rockcod): 117498133
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Entry
117498133 CDS
T09643
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117498133 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117498133 (dysf)
Membrane trafficking [BR:
tben04131
]
Endosome - Lysosome transport
Others
Ferlins
117498133 (dysf)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117498133 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
Pex24p
CEP76-C2
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
117498133
NCBI-ProteinID:
XP_034006111
EnsemblRapid:
ENSTBNG00005014521
LinkDB
All DBs
Position
Unknown
AA seq
2133 aa
AA seq
DB search
MLRVFILCAERLHTPDDDISDAYCSVKYEGSKKKTKVVKNNPNPVWNEGFEWDLKGIPLD
SGAELHCVVKDHEKMGRNRFLGETHLALRDVLNSPNFAATFTVSLLDTKRNNTGATLTLQ
VSYLPPPGASPLYHPPPHPEHLPHSNPGVEMDTVTMISLDTLGDEDTESMIMVDPPEDQG
GDDGRSMVIVGPQGSGRESPAAQTPKRSPPSYNTQGGLRKRRRGNSSHNKPLPNKPQDLQ
VRVRIIEGRQLPGIHIKPVVKVTVAGQNKRTRIRKGNNPVFDETFFMNFYETPSDLFDEP
IFITVCDSRSLRTDAVIGEFKLDVGTVYNEHRHCFLRKWLLLCDPDDLSAGVKGYLKVSL
LVLAAGDEPPADKRECVEDKEDIEGNLLRPAGLSLRGATFSLRIFRAEDLPQMDDAFMDG
MRQILGFDSNRKNLVDPLVEIHFAGKTVCTKIMEKNANPQWNQSLSMPIRFPSMCEKMRI
RILDWDRASHNDVIGTTHLCMSQISAPGGEIDDDLTPRTAHSGMDDSLGFLPTFGPCFVN
LYGSPREFTAFNDPHEALNLGKGEGVAYRGRVLVELTTKLADKPEQKTEDIPSDDQLVVE
KFLRKRKFSLFVAFYSATLLQDVDDAIQFEVSIGNYGNKFDYTCLPLASTTQFSRAVFDG
CHYYYLPWGNIKPVVVLSSEWEDIRPRIEALNMLLAAIERLEEHLQKVQLEVKAGGDLED
LELRVVEMLDQVITDCSEDLPSLDEWQCATPLDRSLRHIRSLTLQQILSSAEALKHGPAT
DLTAVLEQAEDWAARMRSIAQEPQNSLPDIVIWMLQGDRRVAFHRIPAHTVLFSKDNCGK
HCGQMQTVFLKSPQASGAEAKLPGQLRVKVWFGLAADVKHFNQYAEGKLSVFAETYENQT
RLALVGSWGTTGLTYPKFSDVTGRVKLPKDSFKPSPGWSWAGDWFICPEKTMLFDVDAGH
MTFSEEVFENQMRLPGGQWIGMTEGYTDVNGEKAVPKDEVECPPGWVWEEVEWSEDLNRA
VDDQGWEYGLTIPPDRRPKSWVPAEKMYHTNRRRRWIRMRRRDQQKMEALRKRGPDEAER
EGWEHASLFGWRFHLKPRKTDSFRRRRWRNRMEPLEKTGPAAIFALECSLSSIEDRNEDK
SVTTTFGVNRPTISCFFDRGTRYHLRCYLYQARDLLAMDKDSFSDPYAIVSFLHQSQKTV
TVRNTLNPTWDQTLIFYEVEIFGDPEGTMSSPPNVVVELYDQDTYGADEFMGRCVCPPSL
SSSPRLTWFPITRGEKSAGELLAAFQLIRREKPAVHHIPGVEGDFMTSNHVLDELMFPGF
LSEHLQQAEDESDLPHPPHQREPNVFVVPQGIKPVLQRTAIEILAWGVRNLKSFQLASIS
SPSLQVECGGISVQSCVIRSMKKKPNFDLNTLILDVRLPCEELYMPPIVIKVIDNRQFGR
KPVVGQCTIRSLEDYRCSLEEEEEEEEEEEEEGWRRQTPQFSGDVFIDIDDQEPLVPEQL
ADGSGSAIINLSASSESLHAEEFMDWWSKFYASTGEKNKYGTYLEKGFDTLKVYDRELEK
VESFGGLSDFCQTFKLQRGKTQDEGEDPSVVGEFKGMFKIYPLPDDPSTPPPPRQFRKLP
PNGNEECVVRVYVIQAQGLQPKDTNGKCDPYVKITLGKKTINDHENYIPCTLDPVFGKMF
EITCSLPLDKDLKVMLYDHDMLSKDEKIGETLIDLENRFLSRHGAACGLPQSYSLSGVNQ
WRHQLTPRQLLLRVCERRNLKRPIYQEDVVVFRGFRYSAADLEDKNVSKRHLGPLKERLS
LHILRKLGLVPEHVESRALYSPLQPEIEQGRLMMWVDLFPKSMGPPGAPFNITPRKAKKF
FLRCIIWNTSDVILDDISLTGEKMSDIYVKSWMDGHEHNKQKTDVHYRSLGGEGNFNFRF
LFPFHFLPAEQLCVIDRKEHFWSLDKAETKVAPKLTVQIWDNDKFSFDDYLGHLVLDLNH
MLRPAKSPEKCDLQLLQQAGGKLVSLFEQKTARGWWPCSCVMNGERSVAGKVEMSLEIVT
EQEHEERPAGVGRDEPNMNPHLEEPQRPDTSFLWFSSPFKTLKFILWRRWKWFIILFIIF
FFVFLFLGVFLYSFPNYAAMKMVGPFGPAKPSE
NT seq
6402 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgtgtttattctgtgtgcagagcgtctgcatacgccggacgacgacatcagt
gatgcctactgcagcgtcaaatatgaagggtctaagaagaagacaaaggtcgtcaagaac
aaccctaaccccgtttggaacgagggttttgaatgggatctgaaggggattcctctggac
tctggagcggagctgcactgtgtcgtcaaagatcatgagaagatggggagaaacaggttt
ctgggggagactcacctggctctcagagacgttcttaactctccaaacttcgccgccacc
ttcaccgtctccctgctggacaccaagaggaacaacacgggggcgacgttgaccctgcag
gtttcgtacctccctcctccaggagcgtctcctttatatcatccgcccccccaccctgag
catctgccgcacagcaaccccggggtggagatggacaccgtcacaatgatttctctggac
actttgggggatgaggacacggagagcatgataatggtggatcctccggaggaccaagga
ggagacgacgggcgctccatggtcatcgtgggtcctcaggggtcgggccgcgagtcgccc
gccgctcagaccccgaaacgctccccgccgtcttataacacccagggcggtctgaggaag
aggaggagggggaacagcagccacaacaaacccctgcccaacaaaccccaggatctgcag
gtccgtgtgcgcatcatcgagggacgacagctgccgggcatccacatcaaacctgttgtt
aaggttactgttgccgggcagaacaagaggactcgcatcagaaagggaaacaacccggtc
tttgacgagacattcttcatgaacttctacgagactccttcagatctgtttgacgagccg
atcttcatcactgtgtgtgactctcgctctctcagaactgatgctgtgatcggagaattc
aagttggatgtgggcaccgtctacaatgaacacagacactgcttcttgaggaagtggctg
ctgctgtgtgaccctgatgacctctctgccggggtcaaaggttacctgaaggtcagcctg
ctggttctggcagctggagatgagccaccggctgataaacgcgagtgtgtggaggataaa
gaggatatcgaggggaacctgctgaggcctgctggtctttctctgagaggagccaccttc
tccctgaggatcttcagagctgaagacctgccgcaaatggacgatgcgttcatggacggg
atgaggcagatcctcgggtttgacagcaacaggaagaacctggtggatcctctggtggag
attcacttcgctgggaaaactgtgtgcactaagatcatggagaagaacgccaacccacag
tggaaccagagtctgtccatgcccataagatttccctccatgtgtgagaagatgaggatc
agaattctggactgggacagagccagtcacaatgatgtcatcggcaccacccacctctgc
atgtctcagatctccgcccccgggggagagatagacgatgacttgactcctcggaccgcc
cactctggcatggacgacagtctcggttttctgccgacgttcggtccgtgtttcgtgaat
ctgtacggcagcccgagagaattcaccgccttcaacgacccacacgaggcgctcaacctc
ggaaaaggggagggcgtagcgtaccgaggtcgagttttagtggagctaacgacaaaactg
gcggacaaaccggagcagaaaactgaagacatcccgtcagacgaccagctggtggtggag
aaattcctgaggaagaggaagttctctctcttcgtggcgttttactcggccacgctgctg
caggacgtcgacgacgccatccagtttgaggtcagcatcggaaactacgggaataaattc
gactacacctgtctccctttggcatccacaacacagttcagccgcgccgtgttcgacggg
tgccactactactacctgccgtgggggaacataaagccggtggtggttctctcctcagag
tgggaagatatcagaccgaggatcgaggcgctcaacatgctgctggcagccatcgagaga
ctggaggagcacctgcagaaggtgcagttggaggtgaaggcaggaggggatctggaggat
ctggagctccgggtggtggagatgttggatcaggtcatcacagactgcagtgaggacctc
ccctccctggatgagtggcagtgtgcgactcctctggaccgctcgctcagacacatccgc
tctctgaccctgcagcagatcctctcgtcggccgaggctctgaagcacggcccggccacc
gacctgaccgccgtgctggagcaggccgaggactgggccgcacgcatgaggagcatcgca
caggagcctcagaacagtctcccggacatcgtgatctggatgctgcagggcgaccgcagg
gtggcgtttcatcgaatccccgcgcacaccgtgctcttctccaaggacaactgtgggaaa
cactgcggacagatgcagaccgtcttcctcaagagtcctcaggccagcggagcagaggct
aaactccccggtcagctgagagtgaaagtgtggtttggattggctgccgacgtcaaacac
ttcaaccaatacgctgaggggaaactgtccgtgttcgctgagacctatgagaaccagacg
cgcctcgccctggtgggcagttggggaactacaggtctgacgtacccaaagttcagtgac
gtcacggggagagtgaagctgcccaaagacagtttcaaaccctcgccgggctggagctgg
gccggagactggttcatctgccccgagaagaccatgctgtttgacgtggacgccggtcac
atgaccttctcagaggaagtgtttgaaaaccagatgaggctcccgggcggacagtggatc
ggcatgacggagggatacactgacgtgaatggagaaaaggcggtgccgaaggacgaggtg
gaatgtcctcctggttgggtttgggaggaggtggagtggagcgaagatctcaaccgagct
gtggacgatcaagggtgggagtacggcctcaccatccctccggaccgccgtcctaaatcc
tgggtcccagcagagaagatgtatcacaccaaccggagaagacgctggatccgcatgaga
cgcagagaccagcagaagatggaggcgctcaggaagcgtggtcctgatgaagcagagagg
gagggctgggagcatgcctctcttttcgggtggaggttccacctgaagccgaggaagacg
gacagttttcggaggagaaggtggagaaaccgcatggagccgctggagaagactggaccc
gccgccatctttgctctggagtgttctctgagcagtatagaggacaggaatgaagacaag
tccgtcacaacaacgttcggcgtcaacagaccgaccatttcctgtttctttgaccgcggc
acccgctaccacctgcgttgctacctgtaccaagccagagatctgctggccatggacaaa
gacagcttctcagacccgtacgccatcgtctcgttcctccatcagtctcagaaaacggtg
acggtgagaaacaccctgaaccccacctgggatcagacgctcatcttctacgaggtggag
atattcggagaccctgagggcaccatgtcgtctccgcccaacgtggtggtggagctctac
gaccaggacacatacggtgcagatgagttcatgggccgatgtgtgtgtcctccctctctc
tcctcctctcctcgtctcacctggtttccgatcactcgaggagaaaagagcgccggagag
ctgctggccgccttccagctcatacgcagagaaaagccagcagttcatcatattcccggg
gtagagggagacttcatgacgtccaaccacgttctagacgagttgatgtttccaggattc
ctctctgaacacctgcagcaagcggaagacgagtcggaccttcctcaccctcctcatcaa
agagagcccaacgtcttcgtggttcctcagggaatcaaaccggttctgcagagaaccgcc
atcgagatcttagcgtggggggtgcgtaacctgaagagcttccagctggccagcatctcc
tctcccagcctgcaggtggagtgtggaggcatctccgtgcagagctgcgtcatccggagc
atgaagaagaaaccaaacttcgacctgaacacactcatcctggacgtgaggcttccctgt
gaggagctctacatgccgcccatcgttatcaaagtgatcgataaccgtcagtttgggagg
aagccggtggtcgggcagtgcaccatccgctctctggaggactatcgctgcagcctggag
gaggaagaggaggaggaagaggaggaggaagaggaggggtggagacgtcaaacgccacag
ttttctggggatgttttcattgacatcgatgaccaggagccactcgtacctgaacagctt
gcagatggatccggctcagctatcattaacctttctgcctctagtgaaagccttcatgcg
gaggagttcatggactggtggagtaaattctacgcttcgaccggagagaagaacaagtac
gggacgtatctggagaaaggcttcgacacactgaaggtgtacgacagggagttggagaag
gtggagagttttgggggtctgtcagatttctgtcaaacgtttaaacttcagagaggaaag
actcaggacgaaggagaagacccttcagtggtgggagagttcaagggtatgtttaagatc
tacccgctgccagacgacccctcgacccctccgcccccccgacagttccggaaacttcct
cccaacggcaacgaggagtgcgtggtgcgagtctacgtcatccaggctcaagggctgcag
cccaaagacaccaacgggaagtgtgacccctacgtgaagatcactctgggcaaaaagacc
atcaacgaccacgagaactacatcccctgcacgctggaccctgtttttgggaagatgttc
gagatcacctgctccctccctctggataaagacctgaaagtgatgctgtacgaccacgac
atgctgagcaaagacgagaagatcggagagacgctgatcgacctggagaaccgcttcctg
tccagacacggagccgcgtgtggtctgccacagtcctacagcctgtcaggggtgaaccag
tggaggcaccagctgacccccaggcagctgctgctcagagtgtgtgagcgcaggaacctg
aagaggccgatctaccaggaggacgtggtggtcttcagaggattcagatactccgctgca
gacctggaggacaagaacgtgtccaagcgtcacctcggtcctctgaaggagcgtctgtct
ctccacatcctgaggaagctgggactggttcctgaacacgtggagagccgagcgctatac
agccctctgcagccagagatagagcagggccgtctgatgatgtgggtcgatctgttccca
aaatccatgggaccccctggagctccgttcaacatcacaccacgcaaagccaagaagttt
ttcctgcgctgcatcatctggaacaccagcgacgttatcctggatgatatcagcctcacc
ggggagaagatgagcgacatctacgttaaaagctggatggacggtcacgaacacaacaaa
cagaaaacagacgtccactatcgctctcttggaggagagggaaacttcaacttcagattc
ctgttccctttccacttcctgccggcagagcagctgtgtgtgatcgacaggaaggaacat
ttctggagtctggataaagccgagactaaagtggctccgaaactcaccgtccagatctgg
gacaacgacaagttctccttcgacgactacctcggtcacctggtgttggacctgaaccac
atgctgcgtccggccaaatctccggagaaatgtgaccttcagcttcttcagcaggcgggg
gggaagctggtgtctctgttcgagcagaagactgcgagagggtggtggccctgcagctgt
gtgatgaacggagagaggagcgtcgctgggaaggtggagatgtctctggagatcgtgacg
gagcaggaacacgaggagagaccagcgggggtcgggagggacgaacccaacatgaacccc
cacctggaggagcctcagcgtccggacacctccttcctgtggttctcctcccccttcaag
acgctgaagttcatcctgtggaggcgctggaagtggttcatcatcctcttcatcatcttc
ttcttcgtcttcctcttcctcggagtcttcctctactccttcccgaactacgctgccatg
aagatggtcggacctttcggaccggcaaagccctcagagtga
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integrated database retrieval system
