Trematomus bernacchii (emerald rockcod): 117498256
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Entry
117498256 CDS
T09643
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tben01001
]
117498256 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117498256 (prpf4bb)
Enzymes [BR:
tben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117498256 (prpf4bb)
Protein kinases [BR:
tben01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
117498256 (prpf4bb)
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117498256 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
Pkinase_fungal
CSTF_C
CoV_S1_C
Motif
Other DBs
NCBI-GeneID:
117498256
NCBI-ProteinID:
XP_034006167
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MADVEMDIASTIMNNGNEHVKQDLEIQEKSGNEDSGDVSEEEGEEEEEAETNGEKTEEAS
KHHSSSSGKHKRKKHKHRSKHKKHKHVSDEDKDRKRKHRHKHRKHKRKEGSSPAAAAAAA
AAAAAALALFASGHKKIESSPSSGNPSLDDRALLEDLEKQRAMIKAELDSQLMEGKVQSG
MGLILQGYNSGSEEDGEGRMRNGEQRQRGSSGKTTSPRGAKGGKSRRDSTEGSKSASKRR
SRSKSADRLGQVKEPKQEKVTKTPKDTTGKDRGRGRSRSKDRKPSDSTDRSKDRTTKSNS
GSRTDKRSSPPRDERPNQERARGRSRSRERPGRSDADRDKRPAKSPSKDASSGKENRSPH
RRGPHSPMKKRSASPRHREAHNPAATAADRASKQSQSPIRTRSPPRRPRSRSPDPRRREA
DRQDSPMRKRPRPDAGPGRDRSRENSPRGVARRRMSRSPLRRRSMSPRRRSRSSPRRRSR
SPLAHRPGDRDRYGRPRQYRRSMSRDRDRRRRRTRDEDKFKGSLSEGMKVDQESSEGEVL
EDFDGEEVDEEALIEQRRQQRLAIVQKYKAGNEDSNMVSEPCSPQSSTRSRSPSPDDILE
RVAADVKEYERENLNTFEASIKAKHNLIAQEKDGANPKKPSAPDMFTESDDMFAADFDNA
RMRAAGVGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGHGVFSNVIRARDT
ARAGQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVF
EPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESK
TILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLHELYTGKI
LFPGSSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVMS
TINQTKDLLVDMIGHQRLPEDQRKKVMLLKDMLDSTLMLDPAKRISINQALQHPFIQEKI
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttgagatggacatcgcgtccacaataatgaataatggcaacgaacacgta
aagcaagatctagagatccaggaaaaaagtggaaatgaggacagcggagatgtgtctgaa
gaagaaggagaagaagaggaggaggcagagactaatggtgagaagactgaagaggcgtcc
aaacatcacagcagcagcagcggtaaacacaagcggaaaaaacacaagcatcgcagtaag
cacaaaaaacacaagcatgtctctgatgaggacaaggaccgtaaacgcaagcatcgtcac
aaacacaggaaacacaagcgcaaagagggttcgtctcccgctgctgctgctgctgctgct
gctgctgccgctgccgccctcgccctgtttgcctccggccacaaaaaaattgaatcctct
ccctcctctggaaatccaagtctggatgacagggccttgctggaggacttggaaaaacag
agggccatgatcaaagctgagctggacagccagttgatggagggaaaggtccagtcaggc
atgggtctgatccttcagggttataactctggatccgaagaggatggagaaggcaggatg
agaaatggagaacagcgtcaaaggggcagctcaggaaaaactacatctcccagaggggca
aaaggtgggaaatctagacgggactcaacagagggtagtaagtccgcctccaagcgccgt
agtcggagtaagtctgctgacaggctagggcaggtcaaggagccaaagcaggaaaaggtg
accaaaacccccaaggacacaactggtaaagacagaggccgcggcagaagcaggtcaaaa
gacagaaagccttcggacagcactgataggtccaaggacagaacaacgaagtccaactca
ggcagccgcactgataaacgttcctctccaccgcgggacgagagaccaaaccaggagaga
gcaagagggcggtccagatcacgagaacgaccgggtcgctcagacgccgacagggacaaa
cggcccgctaagtccccatccaaggacgcttcctctgggaaagaaaaccgctcccctcac
agaagagggccccacagccctatgaagaaacgcagtgcttcccctcgccacagagaggcc
cacaatcccgcagctactgccgctgacagggcatccaaacagagccagtctcctatcaga
acaaggtccccccctcggagaccccgcagccgctcgccagaccccaggaggagggaagct
gacagacaagactcaccgatgaggaagcgcccccggccagatgctgggccaggcagagat
cgctcacgagagaacagccccagaggagtcgctcggcgcaggatgagtcgctcacctcta
agaagaaggtccatgtcacctagacgacgctcccgctcctcccctcgcagacggagcagg
tctccactggcacacaggccaggggacagggaccggtatggaagacccagacagtaccga
cgctcaatgtcccgcgaccgggacaggagacgaagacgcaccagagacgaagacaagttc
aagggcagcctgtcggagggcatgaaggtcgaccaggagtcctcagagggagaagtttta
gaggactttgatggagaggaggtagatgaagaagctctcattgaacagcgtcgccagcag
cgcttggccatcgtccagaaatacaaggctgggaatgaggactccaacatggtgtcggag
ccctgcagccctcagagcagcacacgcagccgttccccctccccagacgacatcttggag
cgagtagctgcagacgtcaaggagtacgagcgggagaacctgaacaccttcgaggccagc
atcaaagccaagcacaacctcatcgcccaggagaaagacggagcaaacccaaagaagcct
tcagcgcccgacatgtttacagagtcagatgacatgtttgctgctgactttgataatgcc
aggatgagagcagcaggtgtagggaaggacttcaaagagaaccccaacctcagggacaac
tggaccgatgctgagggttactaccgggtgaatattggggagacacttgacaagcgctac
gatgtttacggctacaccggccatggagtattcagcaacgtgatcagagccagggacact
gccagggccggccaggaggtggcagtcaagatcatcagaaacaatgagctcatgcagaag
accgggttgaaggagttagaattcctcaagaagctgaatgatgcggatcctgatgacaag
ttccactgcctccgcctcttcaggcacttctaccacaagcagcatctttgtctggtattt
gagcctctcagtatgaatttgcgagaggtgttgaaaaaatacggtaaagatgttgggctc
cacatcaaggccgtgcgctcctacagccagcagcttttcttggccctcaagctgctcaaa
cgctgcaacatacttcatgctgacatcaagccagacaatatcctggtgaatgagtcaaag
accattttgaagctctgtgattttggttctgcatcacatgtcgctgacaatgacatcaca
ccatacctggtcagcagattctacagagctccagaaatcatcataggaaagccgtacgac
tatgggatcgacatgtggtctgttggctgcactttacatgagctttacactggcaaaatc
ctgtttcctggatcctccaacaaccacatgatcaaactagctatggacctcaaaggcaag
atgcccaacaagatgatccgtaaaggcttgttcaaagaccagcacttcgatcagaattta
aacttcctgtacattgaagtagacaaagtgacagaaagggagaaggtgacggtgatgagc
accatcaaccagaccaaagacctgctggttgacatgataggacaccagcgactgcccgag
gatcagaggaagaaagtgatgctgctgaaggacatgctggatagcaccctaatgctggac
ccagccaaacgcatcagcatcaaccaggccctgcagcacccctttatccaggagaaaatc
tga
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