Trematomus bernacchii (emerald rockcod): 117498264
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Entry
117498264 CDS
T09643
Symbol
itgav
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-V
KO
K06487
integrin alpha V
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04081
Hormone signaling
tben04145
Phagosome
tben04148
Efferocytosis
tben04510
Focal adhesion
tben04512
ECM-receptor interaction
tben04514
Cell adhesion molecule (CAM) interaction
tben04518
Integrin signaling
tben04810
Regulation of actin cytoskeleton
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117498264 (itgav)
04512 ECM-receptor interaction
117498264 (itgav)
04514 Cell adhesion molecule (CAM) interaction
117498264 (itgav)
04518 Integrin signaling
117498264 (itgav)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117498264 (itgav)
04148 Efferocytosis
117498264 (itgav)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117498264 (itgav)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117498264 (itgav)
04810 Regulation of actin cytoskeleton
117498264 (itgav)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117498264 (itgav)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117498264 (itgav)
04515 Cell adhesion molecules [BR:
tben04515
]
117498264 (itgav)
04090 CD molecules [BR:
tben04090
]
117498264 (itgav)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117498264 (itgav)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117498264 (itgav)
Exosomal proteins of epithelial cells
117498264 (itgav)
Cell adhesion molecules [BR:
tben04515
]
Integrins
Integrin alpha subunits
117498264 (itgav)
CD molecules [BR:
tben04090
]
Proteins
117498264 (itgav)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
117498264
NCBI-ProteinID:
XP_034006169
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MSSAAGRPGLPVLLVLPVLLTLLCGILPLGSGFNLETERPSVFSGPERSYFGFSVDFFLN
SPKSDILVGAPRANASSPSSSAVVEGGAVYTCPWNHASCQQLQFDNTDDRENTDGVQMEF
KSKQWFGASVRSDGEHILACAPLYQWSTFGGAEREPVGTCFLKKGATVVEYSPCRSNAIS
PEGQGFCQAGFSVDFLKKNNRVVVGGPGSFYWQGQLISDDVSEIFTRFSKTEFVTPYGNT
LATKSASAQYDDSYLGYSVTVGDFNDDGKEDYVTGVPRGDKALGYVNIFNGINMDSMVNF
TGTQMAAYFGHSVAATDVNNDGLVDLFVGAPLFMDRGSDGKLREVGQVSVYMGRGGFSFH
PPQLLTGSEVYARYGSAIADLGDLDMDGYNDIAVSAPYGGPDHHGLVYIHNGRPKGPDSS
PSQVLQGKWASSYMPASFGYSMTGNTDIDQNGYPDLLVGVFGADKAVLYRARPVISVNAT
LDMTPQIINPEDKSCTLPGTSTQVSCFTVKYCVKASGRGAPATLNFRVDLLLDRLKQKEA
TKRVLFLHSQAFHFSKNVTVSNGKGPACEEQPVFLRDDRDFRDKITPISVAMEFSLDYQR
AADATGLLPILDISAPTNVTKQAHILLDCGDDNICKPDLRLSVKSDRDQIYIGDDNALTL
EISAENQGEGAYEAELHVYPPPQADFTGVVRSQTLSRLSCAYKKENQTKMVVCDLGNPMK
GGTKVLAELRFSVHQLSEEDTYVKFDVQMVSSNQFDNTSPRVSSITQLAVLAKVSIRGTS
SPGQVLLPIANWKLREPPVVGDDIGPQIVHVYELLNSGPSTISKASLIVDWPHQYRNGSL
LYITSFDTDGPINCTTDIEINPFNVSNPLSSGGRNTSSGGGCPPRETEGRNTNHVKKREL
ETRDSQNDVQNLDCSTAQCLRLKCQVGRLERRKHAILFIYSRLAVNNFLRTENQNRSYAV
RSTATFNVIQMPYKNLVSELPSNSTTVSVSVMWVTEPPTAVPGWVVALAVLAGLLLLALL
IFIMYKLGFFKRVRPPQEDCTEKEQLQPEENGNTDA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggcagctggacggccgggtctcccggttctcctggttctcccggttctcctc
actctactctgcgggatcctgcctctcggatccggattcaacctggagaccgagagaccc
tccgtgttctccggacccgaaaggagctacttcggcttctccgtggacttcttcctcaac
agccccaagtcagacatcctggtcggggctccccgggccaacgcctcctctccctccagc
agtgcagtggtggaggggggggcggtgtacacctgtccctggaaccacgcctcctgccag
cagctgcagtttgacaacacagatgacagggagaatacagatggagttcagatggagttt
aaatctaaacagtggttcggagcgtcggtacgatctgacggagaacacatcctggcatgt
gctcctctctatcagtggtccacgttcgggggagccgagcgggagccggtgggaacgtgt
ttcctgaagaagggagcgacggtggtggaatactcgccctgcagatccaatgctatctct
cctgaaggtcagggcttctgtcaggccggcttcagcgtcgacttcctgaagaaaaacaac
agagtcgtggtgggaggaccgggcagcttctactggcagggtcagctgatttcagacgac
gtctctgagattttcactcgcttcagtaaaactgaattcgtcactccgtacggaaacact
ctggccaccaagtcagccagcgcccagtacgacgacagttacctaggatactccgtgact
gtgggagacttcaacgatgatggaaaagaagattacgtgaccggagttccacgaggagac
aaggcgctgggttatgtgaacatctttaacggcatcaacatggactctatggtgaacttc
acaggaactcagatggcggcttactttggacattcggtggcagcgactgatgtgaataat
gacggtctggtggatctgtttgttggagctcctctcttcatggacagaggctccgatgga
aaactgagggaggtgggacaggtgtcggtgtatatgggccgtggaggattctccttccac
cccccccagctgctcactgggtcagaggtttacgcccgatacggatctgccatcgccgat
ctgggagacctggacatggacggatacaacgatatcgctgtctcggctccctatggaggc
cccgatcatcacggcctggtctacatccacaatggccgccccaaggggcccgactcctcc
ccttctcaggtcctgcaggggaagtgggcgtccagctacatgcccgccagcttcgggtac
tccatgaccggaaacacagacatagatcagaacggatatccagatttattggtgggagtg
ttcggagcagacaaagctgttttatacagggctcgtccagtgatcagtgtgaacgccacg
ttagacatgacgccacagatcatcaacccagaggacaaatcctgcaccctgcctggaacc
agcactcaagtgtcctgtttcacggtgaagtactgcgtgaaggccagcggccgtggagct
ccagctactctcaatttccgggtggacctccttctggaccgcctgaagcagaaggaggcg
acgaagcgagtcctcttcctgcacagccaggccttccacttctccaagaacgtgacggtg
tccaacgggaagggcccggcctgcgaggagcagccggtgttcctcagggacgaccgtgac
ttccgggataaaatcacgccgatctccgtggcgatggagttcagtctggattaccagcgg
gcggccgacgccaccggcctgctgcccatcctcgacatatcggcgcccaccaacgtcacc
aagcaggctcacatcctgttggactgtggagacgacaacatctgtaaacctgacctgagg
ctgtccgtgaagagcgaccgggatcagatctacatcggagacgataacgctctgactctg
gagatcagcgctgagaatcagggggagggggcgtacgaggccgagctgcacgtctacccc
cccccgcaggccgacttcaccggggtggtccgcagccagaccctgagccggctgtcctgc
gcctacaagaaggagaaccagaccaagatggtggtgtgtgaccttggaaaccccatgaag
ggaggaaccaaggtgctggcagagctgcgtttcagtgtccaccagctgtcggaggaggac
acctacgtgaagtttgacgtgcagatggtcagctccaatcagtttgacaacacgagtcct
cgagtctccagcatcacccaactggctgtcctcgctaaagtgtccatcagagggacttcc
tctcctggtcaggttttgctcccgatcgctaactggaaacttcgagagcctccggtggtc
ggagacgacatcgggccgcagatagtacacgtctacgagctgctgaacagcgggcccagc
accatcagtaaggcctctctgatcgtggactggcctcatcagtacaggaacgggtcgctg
ctctacatcacatccttcgacaccgacggaccaatcaactgcaccacagacatcgagatc
aacccattcaacgtctccaacccgctgtcctcgggagggaggaacaccagcagcgggggg
gggtgccctcccagagagacggaggggaggaatacaaaccacgtgaagaagagagagctg
gagacgagagactcgcagaacgacgtgcagaacctggactgcagcacagctcagtgtttg
cgtctgaagtgtcaggtgggtcgtttggagaggaggaagcacgccatcctcttcatctac
tccagactcgctgtcaacaacttcctgcggactgagaatcagaatcgatcgtacgcagtt
cgatccacggcgaccttcaacgtcatccagatgccgtacaagaacctggtgtcagagctg
ccgtccaacagcaccaccgtgagtgtgtcggtgatgtgggtgacggagccccccaccgcg
gtgcccggctgggtggtggcgctggcggttctggcgggtcttctgctgctggcgctgctc
atcttcatcatgtacaagctgggtttctttaagcgagtgcgccccccccaggaggattgc
actgagaaggagcagctgcagccggaggagaacggcaacacggacgcctag
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integrated database retrieval system
