Trematomus bernacchii (emerald rockcod): 117498305
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Entry
117498305 CDS
T09643
Symbol
lft1
Name
(RefSeq) lefty1
KO
K04668
left-right determination factor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117498305 (lft1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tben04052
]
117498305 (lft1)
Cytokines and neuropeptides [BR:
tben04052
]
Cytokines
Transforming growth factors (RSTK binding)
117498305 (lft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
CBM96
Tropomodulin
Motif
Other DBs
NCBI-GeneID:
117498305
NCBI-ProteinID:
XP_034006207
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MDFLRACVLCTALFGLSKAFTHQDMKDALLQKLGLDEVPKIHKRDLENLVIPAHIRNKYT
TMLKMHHSRRRRSLPSLAGILRGIPGNADISGEFVYSDTTRQSIVFDMESRIPDNSEVTM
AELKLYQRASYHKRFAVERKNHRPVNNARVSIYWVEVLPNGSNRTSLVDSRLIPIHETGW
KSFDVTQAVHYWSKMQQKTPMYLEVCIEGERPGSYAAEMAKSVRFTTQEQTDNTLGKPEL
ILYTLNLEEYGSRGDCDMNQNKESCCREKYFINFRALTWTQYWIIEPAGYQAFRCTGGCK
QPKRNYGYGERRCTASESAPLPIMYLVKKGDYTEIEVAEFPNMIVEKCACAMDNVSVV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctccgcgcttgtgttctttgcaccgctctcttcgggctctccaaggctttt
acgcaccaggatatgaaggacgcgctgctgcagaagcttggcttggatgaagttcctaaa
atccataaaagggatttggagaatctggttattccggcgcatatcagaaataagtacacg
actatgctgaagatgcaccacagcaggagacgcagatctctgcccagcctggctggcatc
ctgaggggaatccctggcaatgctgatatttctggggagtttgtgtattctgacaccact
cggcaaagcattgtgttcgacatggagtcgaggattccggataacagcgaggtgaccatg
gctgagctgaagctctaccagcgggcctcttaccataaacgcttcgcggtggagaggaag
aaccaccggcccgtcaacaacgcccgggtcagcatctactgggtggaggtgctgcccaac
ggatccaaccggacgtcgctggtagactcacggttgatccccattcacgagacaggctgg
aagagctttgatgtgacgcaggcggtgcactattggtccaagatgcaacagaaaacacct
atgtacctggaggtgtgtatcgagggcgagagacctggcagctacgcggcagagatggcc
aagagtgtgcgctttaccacccaggagcagacggacaacaccttggggaagcccgagctc
atcctctacacactgaacctcgaagaatacggttctcgcggtgactgcgacatgaaccaa
aacaaagaatcctgctgcagggaaaagtacttcatcaatttccgcgccctcacctggacg
cagtactggatcatcgagccggcgggttaccaagccttcaggtgcaccgggggctgcaaa
caacccaaacgcaactacggctacggggagaggcggtgcacggcgtcagagagcgccccg
ttacccatcatgtacctggtgaagaagggcgactacactgagatagaagtggccgagttc
cccaacatgatcgtggagaagtgtgcctgcgccatggacaatgtctccgtagtatga
DBGET
integrated database retrieval system