Trematomus bernacchii (emerald rockcod): 117498337
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Entry
117498337 CDS
T09643
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117498337 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117498337 (lrfn5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_5
ig
Ig_2
LRR_9
Sp38
fn3
LRR_14
V-set
LRR_EndoS
DHU1_N
C2-set_2
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
117498337
NCBI-ProteinID:
XP_034006257
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MESLLVYLIVLGVAVKAHKVQVCPKRCVCQVLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTTVKRKDFANMTRLVDLTLSRNTIGSIAPLAFKDLENLRALHLDSNRLSRIIND
TFSGMSKLHHLNLNNNQLSNIHIGAFNDLTALEELDLSYNNLESAPWVAIQRMSNLHTLN
LDHNMLGYIPEGTFSGLQKLKRLDVTSNKLQKLPPDPIFQRAGVLATSVIMGPTSFALSF
GGNPLRCNCELLWLRRLRREDDLETCASPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVTMRCKARGDPDPIIHWIAPDGRLMSNSSRAAVHSDGTLDILISTVKDSGSFTC
VASNPAGEAQQTVDLVIAKLPHITNNTVAEQEPDPGSSDIATVTKTGVEAGGLPLGNAKT
SQEKKVVIAEATSTSAMVKFNFQRSIPGIRMFQIQYNGTYDDSLVYRMIPPTSKSITVNN
LAAGTHYDLCVLAIYDDQVTSLTATRVIGCIHFTTEPQYLRCHFMQSQFLGGTIVVIIGG
IIVASVLAFIIFLIVRYRVCNQGDTDKALEMGDIRSLSSDGQLQGCGVPKSLSKQVLRPE
KNDKECLRISLPPPEPAKQKQPAVEASTKPTIPDCTVSNSAATHSWHPASPGAPRPKRST
APPKPSEAHRADVELDNMNRNNSSEVKMNTAVALAFPGQPNKWTAAPRGPRPQPAPRHYM
TVPVGGVRVNRRHSLNADSYMEHCYVAYPKPGASLRSKRSLSMSVELPQLDGSTHIHRAR
DKLSKSEWLLESTL
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggagtccctcctggtttacctgatagtcctcggtgtggccgtgaaggcccacaaagtc
caggtctgccccaaacgctgtgtctgccaggtgctcaaccccaacttggcaactttgtgc
gacaaaaagggtcttctgtttgtgcccccgaacatcgacaggcacacggtggagatgcgt
ctcggggataactttgtaaccaccgtcaaacgcaaagactttgccaacatgacaaggctg
gtggacctgaccttgtctcgaaacactatcggctccatcgcacccctcgctttcaaggac
ctggagaacctgcgagcccttcacctggatagcaaccgtctgtcccgcatcatcaacgac
accttcagcggcatgtccaagctgcaccacctcaacctcaacaacaaccagctctcaaac
atacacatcggggccttcaatgatctgacagcgctggaagagctggacttatcctacaac
aacttggaaagtgcgccgtgggtggccattcagaggatgtccaatctccatacgctcaat
ttggaccataacatgctcggttacatcccagagggcaccttctcggggctgcagaagctc
aagaggctggatgtgacttccaacaagctccagaagcttccccctgaccctattttccaa
agagccggggtcctggccacctctgtgataatggggcccacgtcgtttgcgttgagcttt
ggagggaacccgctgaggtgtaactgtgagcttctctggctgcggaggttgcggagggag
gatgatctggagacctgtgcctcaccgcaacacctcgccgggcgctatttctggactgtc
tcagaggaagagttcctgtgtgagcctcctctcatcaccaggcactctcaggagctgcga
gcgttggagggtcagagtgtgacaatgcgctgtaaggccaggggggatcccgaccccatt
atccactggatcgcccctgatggacgcctgatgtccaattcctccagggccgcggtccac
tcagacggcacgttggacatcctcatcagcaccgtcaaggactccggttccttcacctgc
gtggcctccaacccggcaggtgaagcccagcagacggtggatcttgtcattgccaaactc
cctcatatcaccaacaacacagtcgcagagcaggagcccgaccccgggtcatcagatatc
gccacagtgacaaaaacgggggtagaggctggaggcttgcctctggggaacgcgaagacg
agccaggagaagaaagtagtgatcgctgaggccacgtccacctcggccatggtcaagttt
aacttccagaggagtattcctggaatacgcatgttccagatccagtataatggcacctat
gatgattcactggtttacagaatgatacccccgaccagtaagagcatcacggttaacaac
ctggcggcgggaacgcactacgacctgtgtgtgctggccatttacgatgaccaggtgacc
tcgctgacggccaccagggtgatcgggtgtatccacttcaccacagagccgcagtacctg
agatgccacttcatgcagtcccagtttcttggcggcaccattgtggttatcattggaggg
ataattgtggcctcagtgctcgcctttatcatcttcctcattgtgcgctacagggtgtgt
aaccaaggagatacagataaggctctagagatgggggatattcgctcactgagcagtgat
ggacagctgcagggctgtggggttcctaagtccctctccaagcaggtcctgcgtcccgag
aagaacgacaaggagtgcctccggatttccctgccgcctccggagccagccaagcagaaa
cagcccgccgttgaagcctccaccaaacccaccatcccagactgcactgtctccaactct
gctgccactcacagctggcacccggcctccccgggcgctccccggcccaaacgctccacc
gctccacccaaaccctcagaggctcaccgggctgatgtggagcttgataacatgaaccgg
aataactcgtcagaggtgaaaatgaacaccgccgtcgcactggcttttcctggccagccc
aacaaatggaccgcagcacccaggggtccgcggccccagccagcgcctcgacattacatg
actgtacccgtagggggagtgagggtgaaccgcaggcactccctgaacgctgactcatat
atggagcactgttatgtggcttaccccaaacccggggccagcctgcgctccaagagaagc
ctgtcgatgagcgtggagctgccgcagctggacggctccacacacattcaccgggccagg
gacaagctctccaagtctgagtggcttctggagagcactttatga
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