Trematomus bernacchii (emerald rockcod): 117498356
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Entry
117498356 CDS
T09643
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117498356 (gpcpd1)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
117498356 (gpcpd1)
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
CBM53
PI-PLC-X
TreTu_C
KGK
Motif
Other DBs
NCBI-GeneID:
117498356
NCBI-ProteinID:
XP_034006285
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
METTEVTVAVRGETSPGEVIAVVGSCESLGGWSHEKAVILHPHGNDGNTWTTTITVPKGV
VAKYRYLKGFFLESKSAGGPYQVIVNMWETHQHPRTMSPTGSHQNIDDGQFGIHNGVNCV
DSGWLTCQTEIRLRLHYSKTSPVSITKKKFKKSRFRIKLTLEGFEEEDEDEDEEEEGQLS
PASLLRETTTLEISMISANGYKSRHSQPECGNALEPSQWTEYNIHTMDPYNLELTFEFFE
EDMGEHVVQGDAHPGFVGTACLLSSSFAESGKDFGVATLPIMGRNSRQTIGKVRVDYLVM
RPIQGLHCDMSSSFTKYWKKRSTLDVGHRGAGSTHAAKHHRVRENTIASFKSAAQHGAAY
VEFDVHLSKDSVPIVYHDLTCCISTKKKNDKTSLELIEVPVKDLTYDQLQLLKLAHAAAI
KENNDKVSSDLPDDEEEVDEHQPFPSLTQIFQAIPEHVGFNIELKWISQMKDGSWDGNLS
SYFNMNTYLDIILSCVLQRGGKRRIVFSCFDPDICTMVRQKQNKYPILFLTQGISKKYPE
LMDIRCQTTQIAISFAQSENIMGISAHTEELLKNLSYIGDAQSKGLVVFSWGEDNNEHET
RRTLREQGIDGLIYDSICEEKGEQPNLFQVEEQHTLQEVITEETRNSSSCSCYSIPCSMA
PCVSSKVCSGSGESDSGLSSS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggagaccactgaggtaactgtggctgtcagaggagaaacatccccaggggaggtgatt
gcagttgttggtagctgtgaatccctgggaggctggagccatgaaaaagcagtgatctta
catcctcatgggaatgatggaaatacttggaccacaacaatcactgtgcctaaaggagtt
gtcgccaagtaccgctatctcaaaggtttcttccttgagtcaaagagtgcaggtggtccc
tatcaagtgatagtcaatatgtgggagacccatcaacacccgcgcacgatgagccccaca
ggatcccaccagaatattgacgatggacagtttggaattcacaacggggtgaattgtgtg
gactctggctggctcacgtgccagactgagattcgtctgcgcctgcactattctaagact
tctccagtatcaattactaagaagaaattcaagaagtcacgcttcagaatcaagctgacg
ttagaggggtttgaggaggaggatgaagatgaagatgaggaggaagaaggccagcttagt
cctgcctctttgctcagggagaccaccactctggagatcagcatgatcagtgccaacggc
tataagtcccgccactcgcagcctgaatgtggcaatgcactggagccctcccagtggacc
gagtacaacatccacacaatggacccctacaacctggagctcacctttgagttctttgag
gaggatatgggtgagcatgtagtccagggtgatgcacatccaggatttgtgggcacagct
tgcctcctctcctcctctttcgcggagagcggtaaggactttggagtagccacacttccc
ataatgggccgaaattccagacagaccatcggaaaagtcagagtggattacctggtgatg
cggcctatccagggtttgcattgtgacatgagctcctccttcaccaagtactggaagaaa
agaagtactctggatgtgggtcacagaggagctggcagcacacacgcagccaagcaccac
agagttagggagaacaccatagcctcattcaaaagcgctgcccagcatggcgctgcctac
gtagagtttgatgttcacctctccaaagattctgttcccatcgtataccacgatctgaca
tgctgcatttccaccaagaagaaaaatgacaagacttctctggagcttattgaggtgcca
gtcaaagacttgacctatgatcagctgcagcttctgaagctggcccatgccgccgcaata
aaagaaaacaatgacaaagtctcttcagatttgccggacgatgaagaagaggttgatgaa
catcagccattcccttcactcacacagatcttccaagctattcctgagcatgtgggcttc
aacattgagcttaaatggatttcccagatgaaggacgggtcatgggatggcaacctatcc
tcctacttcaacatgaatacctacctggatatcatcctgtcctgtgtcctgcaaagaggc
gggaaaagacgtattgtcttctcctgctttgacccagatatctgcaccatggtgcgtcaa
aaacagaacaagtaccccatcctcttcctcactcagggaatttccaagaagtatcctgaa
ctgatggacatccgctgccagaccactcagatcgccataagtttcgcccagagtgagaat
attatgggaatcagtgcccacactgaggagctgttgaagaacctttcctacattggggat
gcccagtctaaaggcctggtggtgttcagctggggggaggacaacaacgagcacgagacc
aggaggacgctgagggagcagggaatcgatggcctcatctacgatagcatctgtgaggag
aagggggagcaacctaacctctttcaggtagaggagcaacacactctgcaggaggtgata
acagaggagacacgcaacagctcctcctgttcctgctactccatcccctgctccatggct
ccctgcgtttcctccaaggtctgttctggcagcggagagtctgattccggcctcagctcc
tcttaa
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