Trematomus bernacchii (emerald rockcod): 117498474
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Entry
117498474 CDS
T09643
Symbol
psmc6
Name
(RefSeq) LOW QUALITY PROTEIN: 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117498474 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tben03051
]
117498474 (psmc6)
Proteasome [BR:
tben03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
117498474 (psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_16
AAA_22
PRS7_OB
RuvB_N
AAA_lid_PRS2_C
nSTAND3
Prot_ATP_ID_OB_N
DUF815
AAA_14
AAA_7
TIP49
AAA_33
RNA_helicase
AAA_3
bpMoxR
Mg_chelatase
AAA_18
NPHP3_N
AAA_11
AAA_24
AAA_28
DUF5906
Csa3_N
TsaE
NACHT
AAA_25
AAA_17
ATPase
Parvo_NS1
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
117498474
NCBI-ProteinID:
XP_034006490
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MADTREKGLQDYRKKLLEHKEIDGRFKRMXEAVXLREQLREQTKQYEKSENDLKALQSVG
QIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPRE
VDPLVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFLRVGIIPPKGCLLYG
PPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGR
LDRKIHIELPNEQARLDILKIHASPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGLFA
IRADREYVTQEDFMKAVRKVADSKKLESKLDYKPL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccagggagaaagggctgcaagactacagaaaaaaattactggaacacaaa
gaaattgacgggcggtttaaaagaatgtaagaggctgtttaattgagagaacagctgaga
gaacaaacaaaacagtatgagaaatcagaaaatgacctaaaggctctgcaaagtgttggt
cagattgttggagaagttctcaaacagctgacagaggagaaattcattgtcaaggccacc
aacggccccagatatgtggttggatgtcgcagacagttggacaagtctcagctgaaacca
ggaaccagagtggctttggacatgaccacactcactataatgaggtacctgcccagagag
gtggaccctctggtgtacaacatgtcacacgaggaccccgggagcgtgtcctactctgag
atcggaggcctgtccgaacagatccgagagctgagagaggtgattgagcttcccctgacc
aaccctgagctcttcctgagagtgggcatcatcccccctaaaggctgcctgctctacggg
cctccaggcacaggaaagactcttcttgcccgagcagtggccagtcagctggactgtaac
ttcctcaaggtggtgtccagctccatcgtggacaagtacattggtgagagtgccaggctg
atcagagagatgttcaactacgcccgggaccaccagccctgcatcatcttcatggacgag
atcgacgccatcggcggccgtcgtttctctgagggaacttctgctgacagagagatccag
aggacactgatggagctgctgaaccagatggatggcttcgacacgctgcacagagtgaag
atgatcatggccaccaacagaccggacactctggaccccgccctgctgcggcctggcaga
ctggaccgtaaaatccacatcgagctgcccaatgagcaggctcgcctggacatcctcaag
atccacgccagccccatcaccaagcacggagaaatagattacgaagccatcgtgaagctg
tcagacggtttcaacggagccgacctgcggaacgtgtgcacagaagcaggtttgtttgcc
atccgcgctgaccgcgagtacgtcactcaggaagacttcatgaaagccgtgaggaaggtg
gccgattcgaagaagctggagtccaagctggactacaagcctttataa
DBGET
integrated database retrieval system
