Trematomus bernacchii (emerald rockcod): 117498513
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Entry
117498513 CDS
T09643
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1 isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
tben04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117498513 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117498513 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117498513 (snw1)
Spliceosome [BR:
tben03041
]
Complex B
Other components
Prp19-related factors
117498513 (snw1)
Complex C
117498513 (snw1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
117498513
NCBI-ProteinID:
XP_034006549
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MSLASFLPAPTQLSQDQLEAEEKLRAQKCYSTALVSSRREPPPYGHRKGLVPRSLEDFGD
GGSFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARAGQGKDKVIFSKYTDLL
PKEVLHEDTPELQKPDEEAVKELTEKTRTALDKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKSHGDKAGGEDSEVRERDEIRH
DRRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGVPNPRNASEAQYDQRLFNQSKG
MDSGFAGGEDESYNVYDQPFRGGRDMASNIYRPSKNIDKDAYTDDFDTLMNSNRFVPDKE
FSGADHGQKRDGPVQFEEDPFGLDKFLEEAKHHGGSKRPSNSSSSRSKDDYHDKKRRKE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagcgagctttttaccggcgccgacccagctgtctcaggaccagttggaggca
gaggagaagcttcgggcccagaagtgctactccactgccctggtctcgtcccgcagagag
ccccctccttatggacacagaaaaggcttggtgcctcgttcacttgaggactttggagat
ggaggatctttcccagagatccacgtggcccagtttcctctggagatgggtcggaagaag
aagacatccaacgccctggcggtgcaggtggatgcagaaggaaagatcaaatatgacgcc
atcgccagagcaggacagggcaaggataaggttatcttcagtaagtacacagaccttctt
ccaaaggaagttctgcatgaggatactccagaactgcagaagcctgatgaggaggctgta
aaagagctgacggagaagacccgcacggccctggataagcaggtgtctcaaaagattgct
gctgccatgcctgtaagagctgcagacaaacaggcccctgcacagtacatcagatacacc
ccatcccagcagggagtggctttcaactcaggggccaaacagagggtgatccgcatggtg
gagatgcagaaagatccaatggaacctccacgtttcaagatcaacaagaagattcccaga
ggacctccttcgccccctgcccctgtcatgcactccccaagcagaaagatgacagtcaag
gagcagcaggagtggaagattcctccatgtatctccaactggaaaaacgctaagggctac
accattcctcttgacaaacgtctggctgctgatggcagggggctgcagacggttcatatc
aacgaaaactttgctaagctggctgaggcgctctacatcgccgacagaaaggccagagaa
gcagtggagatgagagcccaggtggagaagaagatggcccagaaggagaaggaaaagaag
gaggagaaactcagggaactggcccaaatggctcgagaccgcagggcggggatcaaaagt
cacggggacaaagcaggtggcgaggacagcgaggtcagggagcgtgacgagatccgccac
gacagaaggaaagagagacagcacgacaggaacatttccagggccgctcctgataagagg
tcgaagctgcagagagaccaggacagggacatcagcgagctcatcgctctgggagtgccc
aacccccgcaacgccagcgaggctcagtacgaccagcggctcttcaaccagagcaagggt
atggacagtggttttgccggcggcgaggatgagtcttacaacgtgtacgaccagccgttc
cgcggcggcagagatatggcttccaacatctaccggcccagcaagaacatagacaaggac
gcatacacagatgacttcgacacactcatgaacagcaacaggtttgttccagacaaagag
ttctccggtgccgaccacgggcagaagcgggatggccccgttcagtttgaggaggatccc
ttcggtctggacaagttcttggaggaggccaagcatcacggcggctccaagaggccgtcc
aacagcagcagcagccgctcgaaggacgactaccacgacaagaagcgcaggaaggagtga
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integrated database retrieval system
