Trematomus bernacchii (emerald rockcod): 117498572
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Entry
117498572 CDS
T09643
Symbol
gtf3ab
Name
(RefSeq) general transcription factor IIIA, b isoform X1
KO
K09191
general transcription factor IIIA
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117498572 (gtf3ab)
03021 Transcription machinery [BR:
tben03021
]
117498572 (gtf3ab)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117498572 (gtf3ab)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
117498572 (gtf3ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
TFIIIA_zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_15
Zap1_zf1
zf-C2H2_16
zf-C2H2_8
zf_Hakai
Motif
Other DBs
NCBI-GeneID:
117498572
NCBI-ProteinID:
XP_034006651
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MEEKLQSHKSLVCSFLDCKATFSKSWRLEAHLCKHTGLKPFTCSQCDKSFSARYRLSRHQ
RNHSGEKPHKCLADGCSKGFGTYTSMKNHMARVHQHKDRLYRCKGCGNDFSKRNQLKAHL
GEHLILAFPCTVSGCTRQFLSLRKLKHHEKVHEGYPCENEACTLQGKTWTEYLKHRKEHK
VKVLKEVHCGECNKVFNKAYFKEQHAKRVHCQHKWMLVCLGCGKTFTHGFNLDSHVLGEH
QGKKPFSCSHAGCGKSFTMKESLWRHGVVHDPAKRKLKRLLPKKNQPWHVSQCLNKRFLH
YNIFTVKLPKTKAFKRLKDKP
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaagttgcaaagtcacaaaagcttagtttgttcttttttagattgtaaagct
accttcagtaagtcatggaggcttgaggctcatctttgcaaacacacaggattgaaaccc
ttcacatgttcgcaatgtgacaagagctttagcgctcgctatcgactcagcagacatcag
cgcaatcacagtggagaaaaaccacacaagtgtctggctgatggatgctccaaaggcttt
gggacatacactagcatgaagaaccacatggctcgggttcaccagcacaaggataggcta
tatcgatgtaagggctgtggaaatgatttcagcaagaggaaccaactgaaagcccatctg
ggtgaacacctgattctggctttcccttgtactgtcagtggctgcacaagacaatttctc
tccctccgaaagctgaagcatcatgagaaagtgcatgaaggttacccttgtgagaatgaa
gcgtgtactttgcagggaaagacgtggacagaatatctgaagcacagaaaagaacataaa
gtcaaggtcctcaaggaggtgcattgtggagagtgcaacaaggtgtttaacaaagcctat
ttcaaagaacagcacgcgaagcgtgtccactgtcaacacaagtggatgctggtgtgcctc
ggctgtggtaaaacgttcactcatggctttaacctggacagtcatgtgctgggagagcat
caaggcaagaagcccttcagctgctcgcacgctggctgtgggaagagcttcaccatgaag
gaaagcctgtggcgacatggagtggtgcatgacccagcaaagagaaagctgaagagactg
cttccgaagaagaaccagccctggcatgtttcacagtgtctcaataagagatttttgcat
tacaacattttcactgtgaagctgcccaagacaaaggcctttaaacgtctaaaagacaaa
ccataa
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