Trematomus bernacchii (emerald rockcod): 117498723
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Entry
117498723 CDS
T09643
Symbol
trmt2a
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tben03016
]
117498723 (trmt2a)
Transfer RNA biogenesis [BR:
tben03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117498723 (trmt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_4
PCMT
MTS
Methyltransf_11
Ubie_methyltran
Methyltransf_15
RRM_1
PrmA
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_32
N6_N4_Mtase
Methyltransf_23
RRM_PARP14_3
RrnaAD
Methyltransf_18
UPF0020
AviRa
CMAS
Methyltransf_12
TPMT
Motif
Other DBs
NCBI-GeneID:
117498723
NCBI-ProteinID:
XP_034006755
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MADVSGSPVVDTPASMEEKPVDAPQDSNKDEGKSDGIAEGENEESLDPEMYRYIKEDLFT
SEIYKVEIRNLPKFTGFNDLKKFLAKHGLNPHKIKLFGKQTFAFVTFKNEEERDKAMKMV
HGMQWKSQVLSVRLAKPKADPILRKRKQEEEEGASGQPSSKRTEGGEEEEEEPLSVQIAN
VVTPLWNVPYEEQLKRKEQEVVGVLQRLAKEIGSTNKALLPWLFAQKGKYNRMCCSLEAI
RPSPVQTGYRNKCEFLISMGADGVDKTIGFRMGKYKGGSCAVVGPGETTHVSAEAKRVVS
AFQKFIRTTPYSVYSPETYEGHWKQLTVRTTRTKQAMAMAFFNPQKLDEEEVGALKNSMK
TYFTEGEGKDCGVTSLYFIREGQRTSPNLEGLPCELVSGEGSIHEEMLGLKFRISPHSFF
QVNTGAAEVLYSAVGEWAQLSEDSTVLDVCCGTGTIGISLAKRVKKVIGIEMCQEAVEDA
KVNAKLNGLSNIEFHCGKAEDVFPNILNALVSPNLTAIVDPPRAGLHSKVILAIRRAEHL
KRLVYVACNAKAAMNNFIDLCRAPSKRVHGAAFRPVRAMAVDLFPQTMHLEMLLLLERVD
YDSKQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtaagtggcagcccagtggttgatacccccgcctcaatggaggagaagcct
gttgacgcccctcaggactcaaacaaagatgaagggaaatctgacggaatagctgaaggg
gagaacgaggaaagtttggaccctgagatgtaccgctacatcaaagaagacctcttcaca
tcggagatctacaaagtggagatcaggaatctccccaagttcaccggcttcaacgacctg
aagaagttcctggccaaacacggcctcaacccgcacaaaatcaagctgttcggcaagcag
acgttcgccttcgtcaccttcaagaacgaggaggagcgcgacaaggccatgaagatggtg
cacggcatgcagtggaagagccaggtgctgagcgtgcggctggccaaacccaaagcagac
cccatcctgaggaagaggaagcaggaggaggaggaaggtgcatcggggcagccttcatca
aagcgtacggaggggggggaggaggaggaagaggagccgctcagcgtgcagatcgccaac
gtggtgacgccgctgtggaacgtcccgtacgaggagcagctgaagaggaaggagcaggag
gtggtgggggtcctgcagagactcgccaaagagatcggcagcaccaacaaagccctgctg
ccgtggctgtttgcgcagaaagggaaatacaacaggatgtgttgctctctggaagctatc
cggccgtctcccgtacagacggggtacagaaacaagtgtgagttcctcatctcgatggga
gcagacggggtggataagaccatcggtttccgcatggggaagtataaagggggctcctgt
gccgtggtggggccgggcgagaccacccacgtctccgcggaggccaagagggtggtcagc
gccttccagaagttcatcaggacaacaccatactctgtgtacagccctgaaacatatgaa
ggtcactggaagcagctcactgtcaggactaccaggaccaaacaagccatggctatggct
ttcttcaatccacagaaacttgacgaagaggaagtgggtgcattaaagaactccatgaag
acgtacttcacagaaggagaggggaaggactgcggagtaacgtctctctacttcattaga
gagggtcaaaggacttctcctaacctggagggcttgccctgtgagctggtgtccggagag
ggcagcatccatgaggaaatgctgggtctgaagttcaggatatctcctcactccttcttc
caggtgaacacaggagctgcggaggtgttgtactctgcggtgggggagtgggctcagctg
agtgaagacagcacggtgctggacgtctgctgcgggacgggaaccatcggcatctctctg
gccaagagagtaaagaaggttatcgggatcgaaatgtgtcaggaagctgtggaggacgcc
aaggttaatgcaaagctcaacggtctgagtaacattgagtttcactgtgggaaagctgag
gacgtgttccccaacatcctcaatgctctggtgtcgcccaacctcaccgccatagtggat
cctccgagagccggcctacattccaaggtgattcttgccatcaggagggcggagcacctg
aagaggctggtgtacgtagcatgtaatgctaaagctgccatgaacaacttcattgatctg
tgcagagcgccgtctaaaagagttcacggcgctgctttccgcccggtgcgagcgatggcc
gtggatctgttccctcagacgatgcacctggagatgctgctgctgctggagagggtggac
tacgactccaagcaatga
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