Trematomus bernacchii (emerald rockcod): 117498756
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Entry
117498756 CDS
T09643
Name
(RefSeq) putative claudin-24
KO
K06087
claudin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03272
Virion - Hepatitis viruses
tben04382
Cornified envelope formation
tben04514
Cell adhesion molecule (CAM) interaction
tben04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117498756
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117498756
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117498756
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117498756
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117498756
04147 Exosome [BR:
tben04147
]
117498756
Cilium and associated proteins [BR:
tben03037
]
Other cilia and associated proteins
Stereociliary proteins
117498756
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117498756
Exosomal proteins of colorectal cancer cells
117498756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
CyanoTRADDas_TM
Motif
Other DBs
NCBI-GeneID:
117498756
NCBI-ProteinID:
XP_034006799
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MDSCALELLAMLLFVVAWLCVLASTLLPQWLTMSTALLPVESYELGLWETCVVQDVGGME
CRAYDSLLGLSRDLKLSRILMCASLAVGVLGLLVATPGLHMVNSCRGGPKRILTSIGGVL
GVVSGVLCLVPVSYMAHLAVMHFFDDKVPDVVPRWEFGDALFIGWAGGFLLVVAGLLLVS
ACWYSPGGETEPALQRRYQVMSTDVSFKKRSEYV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggactcctgcgctctggagctgctggccatgctgctgtttgtggtggcgtggctctgc
gtgttagcatctaccctcctgccgcagtggctaaccatgtccaccgcgctgctgccggtg
gagagctacgagctgggcctgtgggagacctgtgtggtgcaggacgtgggggggatggag
tgccgggcctacgacagcctgttgggcctctccagagacctgaagctgtctcgtatcctc
atgtgtgcttcgctggccgtgggcgtgctgggcctgctggtggcgacgcccggactccac
atggtgaacagctgcagggggggccccaagaggattttgaccagcatagggggggtgctg
ggggtcgtgtctggagtgctctgtctcgtcccagtgtcctacatggcacacttggccgtc
atgcatttctttgacgataaagtgccggatgtggttcctcggtgggagtttggagacgct
ctattcatcggctgggcgggggggttcctgctggtggtggccgggctgctgctggtctca
gcctgctggtattcaccggggggggaaactgagccggcgctgcagcgcaggtaccaggtg
atgagcaccgacgtgtccttcaagaagcgatccgagtacgtttag
DBGET
integrated database retrieval system