KEGG   Trematomus bernacchii (emerald rockcod): 117498855
Entry
117498855         CDS       T09643                                 
Symbol
zranb3
Name
(RefSeq) DNA annealing helicase and endonuclease ZRANB3
  KO
K25861  DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tben03032]
    117498855 (zranb3)
   03400 DNA repair and recombination proteins [BR:tben03400]
    117498855 (zranb3)
DNA replication proteins [BR:tben03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    117498855 (zranb3)
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    117498855 (zranb3)
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HNH HNH_5 DEAD nSTAND3 ERCC3_RAD25_C DUF2116 Flavi_DEAD zf-RanBP
Other DBs
NCBI-GeneID: 117498855
NCBI-ProteinID: XP_034006884
EnsemblRapid: ENSTBNG00005017389
LinkDB
Position
Unknown
AA seq 1135 aa
MSECRETDEDIQMEMDDNGLQTPRCETRWSQQLSGLPPKLLQRLMPFQLEGVEFALSKNG
RCMIADEMGLGKTVQAIAVAYAYRKEWPLLVVVPSSLKYPWIEELERWIPELQPGDINLV
ENKSHTMGISSSKVTVLGYGLLTTDARPLVEALIRQKFAVVVVDESHYLKSRNAARTKIL
APLIQNTKRAILLTGTPALGRPEELFMQIDTLYPKRFGTWTDFAKKFCNGHFRYFGTRRQ
WDARGSSNLSELHQRLSEIMIRRLKAEVLTQLPPKIRQRIPFDLPKDAAKEASASFAEWE
RLMKGLGSGVIGTDSNPFTQVMSLVSRMYKQTAIAKAGAVKDYIKMMLEAEQLKFLVFAH
HLTMLQACTEAAIEAKAGYIRIDGSVPSSERMQLVNKFQSDPETRVAILSIQAAGQGLTL
TAASHVVFAELYWNPGHIKQAEDRAHRIGQTASVNVHYLIAKGTFDTVMWAMLNRKETVT
GSALNGKKEYLKADEGDQDKWEFLNFSDAWKPSEMLLPPERNSGDYKEDVFFTHFEKEKQ
HDIRSFFSPGGNKEKKRKRTGDEETSPSETTGRGTNSEEREEIKETETIPDEDFSPQVKR
LRTPQPSPSLRPQRGGKRRSSAGGKLPSSPSFFSMNPRKLLETGPTSEWSCVSCTYSNSG
LMPYCEMCNVKRPSSTAPSGSEPPRPHTPPPGEKDEECIVLSGSDSDPELSRGKTQTPRS
PGGKQSEGEGEDEDEDEPPKDKQKPEEEEEDKRQQIRDKQSAPPHLRTEETAAAGANDDD
EADDEEDDAYTVYPGLQFCASPYTDRIYLYTKDGTPLSSSFTPLDIKLTNWDELPEAFSR
RRENRIQVLRFVQDWSGLAAMKQKLLQRSGRLFHSPTLGLQQLAAAQRPHSSTKRYLGKD
DVAEASLSKAQQEGGSVRLVTKEAFFTKRKSLASEKPPASESAVSESCETMEDQPPSESG
FLQAVDSDGVPLCLSCQQHCSTTGGAWDTRFCSHKCQEEFQLRSSQTYMRSRVLEAEKGV
CQHCGLQAHELFLKVRDAPPDQRKEMLESTWLAQMSLKQLNVMIRAPVEGDFWQVDHIRP
VYSGGGQCSLENLQTLCTVCHKARTAQQAKERSQKKKSVAASKVASDISRFFFRK
NT seq 3408 nt   +upstreamnt  +downstreamnt
atgagcgagtgccgagaaactgatgaggatatacaaatggaaatggacgataatggcctg
cagacccctcgctgtgaaacaagatggtcacagcaactgtcaggcctccctcccaagctc
ctgcagcgtctgatgcctttccaattggaaggagtggagttcgctttatctaagaatgga
cgatgcatgatcgctgatgagatgggtcttgggaagacggtgcaagccattgctgttgcg
tacgcctacaggaaggagtggcccctgctggtggtggtgccctcgtccctgaagtatccg
tggatcgaggagctggagaggtggatccccgagctgcagcctggagacatcaacctggtg
gagaacaagagccacaccatgggcatcagcagcagcaaggtgacggtgctgggttacggc
ctccttactacagatgctcgccccctggtggaggctctgatccggcagaagttcgccgtg
gtcgtggtggacgagtcacattacctcaagtccaggaatgcagcgcgaacaaagatcctg
gcgcctctcatccagaacaccaagcgggccatcctgctcactgggactcctgctctgggt
cggcctgaggagctttttatgcagattgataccctctacccaaagaggtttggaacatgg
acagactttgccaagaaattctgcaacggccatttcaggtatttcgggactcgtcggcag
tgggacgctcgcggatcgtccaacctttcggagcttcaccagcgcctgagtgaaatcatg
atccgtcgtctaaaggccgaagttctcactcagctgccccccaaaatccgccagcgaatc
cccttcgatctgcctaaggacgctgcaaaggaggcctcagccagcttcgcagagtgggag
cgattgatgaagggactggggtcgggggtcatcggcacggacagcaaccccttcacacag
gtcatgagcctggtctcacggatgtacaagcaaactgcgattgccaaggcgggagctgtg
aaggactacattaagatgatgctggaggcggagcagctgaagttcctggtgttcgcccac
cacctcaccatgctgcaggcgtgcaccgaggccgccatcgaagccaaggctggttacatc
cgtatcgatggcagcgtcccgtcgtcagaacgaatgcagctggtcaacaagttccagagc
gacccggagacacgagtcgctatcctcagcatccaggcagccggccagggtttgaccttg
accgctgccagccacgtggtttttgccgagctctactggaaccccggacacataaagcag
gcggaggatcgagcgcatcgcatcgggcagacagcctccgttaacgtgcactacctcatc
gccaagggcaccttcgacaccgtcatgtgggccatgctcaacagaaaggaaacggtgacc
ggcagcgccttgaatggcaagaaggaatatctgaaggccgatgagggcgatcaggacaaa
tgggagtttctcaacttctccgacgcgtggaaaccgagtgagatgctgctgccgccggag
agaaacagcggagactacaaagaggacgtcttcttcactcattttgagaaggagaagcag
cacgacattcgttccttcttctcgccgggcggcaataaggagaagaagaggaagaggaca
ggagacgaggaaacatctccttcagagacgaccggcaggggaacaaactctgaagaaaga
gaggagattaaagaaaccgaaaccatcccagacgaggacttctcgccccaggtgaagagg
ctgcggaccccacagccgagccccagtctcaggcctcaacgtgggggtaaaagaaggtct
tcagccggagggaaattacccagcagccccagcttcttctccatgaacccacggaaactt
ctggagaccggaccaacgtctgagtggagctgtgtgtcctgcacatactccaatagtggc
ttgatgccgtactgcgagatgtgcaacgtcaaacgcccttcttcaactgctccgtcaggc
tcagagccccccaggcctcacacaccccctccgggtgaaaaggacgaggaatgcatcgtc
ctctccggctccgacagcgatccagagctcagtcgggggaaaacacagactcccagatcg
ccgggaggcaaacagagcgagggtgagggtgaggatgaggatgaggatgagcctccgaaa
gacaaacagaaaccggaggaagaagaggaggacaagcggcagcagatcagagacaaacaa
tcagcccccccccacctccgaacagaggagactgctgctgccggggctaatgacgatgat
gaggccgatgatgaagaagatgacgcttataccgtctacccgggacttcagttctgcgcc
agcccttacactgaccggatatatctctacacaaaggacgggactccgttgagctcgagc
ttcacccctctggacatcaaactcaccaactgggacgagctgcccgaggctttcagccgg
cgccgcgaaaatcgaatccaggtactgaggttcgttcaggactggagcggtctggcagcc
atgaagcagaaactccttcagcgcagcggccgcctcttccacagcccgactctgggctta
cagcagctggccgccgcccagcgaccgcactccagcaccaagagatacctcggtaaagac
gatgtggccgaggcctccctgagcaaggcccagcaggaggggggcagcgtccgattggtc
accaaggaagccttcttcaccaagaggaagtcattggcatcagagaaaccacctgcttca
gagagcgcagtcagtgagtcctgtgagacgatggaggatcagccgccctcagagtcaggt
ttcctgcaggctgtggacagtgacggcgtccctctgtgtctctcctgccagcagcactgc
tccaccaccgggggggcctgggacacccgcttctgcagccacaagtgccaggaggagttc
cagttgcgctccagccagacgtacatgcgctctcgtgtgctggaggcggaaaagggcgtc
tgtcagcactgcggcctccaagcacacgagttgttcctcaaagtacgggacgccccgccc
gaccagcgcaaggaaatgctggagagcacttggctcgcgcagatgtcactcaaacagctg
aacgtgatgatccgcgccccggtcgaaggggatttctggcaggtggaccacatccggccg
gtgtacagcggaggagggcagtgctctctggaaaacctgcagactctttgcaccgtctgc
cacaaagcgaggacggctcagcaagccaaagagcggagccagaagaaaaagagcgttgcc
gcgtccaaggttgcatcagacatcagcaggttcttcttcaggaaatga

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