Trematomus bernacchii (emerald rockcod): 117498863
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Entry
117498863 CDS
T09643
Symbol
abcb11b
Name
(RefSeq) bile salt export pump isoform X1
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117498863 (abcb11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117498863 (abcb11b)
04147 Exosome [BR:
tben04147
]
117498863 (abcb11b)
Transporters [BR:
tben02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
117498863 (abcb11b)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117498863 (abcb11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_29
ABC_ATPase
AAA_21
AAA_15
AAA_30
Rad17
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
117498863
NCBI-ProteinID:
XP_034006910
LinkDB
All DBs
Position
Unknown
AA seq
1345 aa
AA seq
DB search
MPSGSVKLHSIKKLGQENHSYEEEEPAGSYANNTTSKADKDDGQEEQPAIRVGFFQLFRY
ASCNEVLMMVMGSVCAVLHGSAQPLMLLVFGMLTDTFIAYDIELNELKDERKECVNNTIQ
WKNYTAFSGMNQSEWVIMNNKTIACGILDIEYEMTNFALYYVGIGAAVFVLGYFQISLWV
ISAARQIQLIRNLYFRQVMRMEIGWFDCTSVGELNTRMSDDINKINDAIADQVAIFLQRF
TTFVCGFCIGFVKGWKLTLVIVAASPLIGIGAGLMALFVAKLTGMELQAYAKAGAVADEV
LTSIRTVAAFGGEVKEVQRYDRNLISAQRWGIRKGLIMGFFTGYMWLIIFLCYGLAFWYG
SSLVVDTAEYTPGTLLQVFFGVLIAALNLGQASPCLEAFASGRGAATIIFETIEREPEID
CLSEAGYKLEKVKGDIEFHNVTFNYPSRPDVKILDQLSVAVKSAETTAFVGPSGAGKSTA
IQLIQRFYDPKEGMVTLDGHDIRGLNIQWLRSLIGIVEQEPVLFATTIAENIRYGRPDVP
MEDVIGAAKQANAYNFIMDLPQKFDTLVGSGGGQMSGGQKQRIAIARALVRKPRILLLDM
ATSALDNESEATVQEALDKVRTGRTTISIAHRLSTIKNADVIVGFEHGRAVESGKHNELL
ERKGVYFTLVTLQSQGDKALNEKARQMVEDEVPEKLNLSRAGSYRASLRASIRQRSRSQL
SNLIPESSVSIAGELGPRAYAVSQPDKSKEDIAEEEEEFVEPAPVARILKYNAPEWPYML
FGSFGAAINGGVNPVYALLFSQILATFSLTDPVAQRKEIDGICVFFVMVGVVSFFTQMLQ
AYAFSKSGELLTRRLRRLGFHAMLGQEVGWFDDHKNSPGALTTRLATDASQVQAATGSQI
GMIVNSLTNIGVAILMSFYFSWKLTMLILCFLPFIALSGAFQARMLTVFAKQDKQAMEVA
GQISGEALNNIRTIAGLGKERTFVELYAAQLHAPYEAALKKAKVYGACYGFSQCVVFLTN
SASYRFGGYLVRQEGLHFSLVFRVISAIVTSGTALGRASSYTPDYAKAKISAARFFQLLD
RVPQISVYSDKGDKWDNFQGNIEFIDCKFTYPTRPDIQVLNGLNVSVKPGQTLAFVGSSG
CGKSTSVQLLERFYDPDHGRVLIDGHDSTGVSVPFLRSKIGIVSQEPILFDCSIEENIKY
GDNSREISMNEVISASKKAQLHSFVMALPEKYQTNVGAQGSQLSRGQKQRIAIARAIIRD
PKILLLDEATSALDTESERTVQEALDKAREGRTCIVIAHRLSTIQNSDIIAVMSRGYVIE
KGAHDELMALKGAYYKLVTTGAPIS
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctggatcagtgaaattgcacagcattaaaaaactgggacaggagaaccacagc
tatgaagaagaagaaccagctggctcctatgcgaacaacacaacttccaaggctgataaa
gatgatggacaggaggagcaaccagcgatacgggtcggcttctttcagctgttccgttac
gccagctgcaacgaggtgctgatgatggtgatggggagcgtctgcgcggtgctgcacggc
tcggcgcagcccctcatgctgctggtgttcggcatgctcaccgacaccttcatagcatac
gacatcgagctcaacgagctgaaagacgagaggaaggagtgtgtgaacaacaccatccag
tggaagaactacactgcattcagtggcatgaaccagtcagaatgggttataatgaacaat
aaaacaatcgcatgtgggattctcgacattgaatatgagatgaccaatttcgccttgtat
tacgttggaattggagcagcggtgttcgtgctgggatactttcagatctccctgtgggtg
atctcggctgccaggcagatccagctcatcaggaacctgtacttcagacaggtgatgagg
atggagatcggctggttcgactgcacctctgtgggggagctcaacacccgcatgtcagat
gacatcaacaagatcaacgatgccattgcggatcaagtcgccatcttccttcagcgcttc
accaccttcgtgtgtggcttctgcattggctttgtgaagggatggaagttaacgcttgtt
attgtggcagcgagtccactgatcggtattggagcaggtctcatggctctgtttgtagct
aagctaacggggatggagctccaggcctacgctaaagctggagctgtagcagacgaggtc
ctcacctccatcaggactgtggctgcttttggtggggaggtaaaggaggtgcagaggtac
gacaggaacctgatctcagcgcagcgctggggcatcaggaagggtctgatcatggggttc
ttcactggatacatgtggctgatcatatttctgtgctatgggctggccttttggtatggc
tccagcctcgtggtggacaccgcagaatacacaccaggaacactattgcaggtgttcttt
ggtgttctgatagcagccctgaatctgggacaggcctccccgtgcctggaggcttttgct
tcaggacgtggagctgccaccatcatctttgagactattgagagagagccggagattgat
tgtctctctgaggctggatataagctggaaaaggtgaaaggagatattgagtttcacaat
gtgaccttcaactacccctccagaccggatgtcaagatcctggaccagctcagtgttgca
gtgaagtcggcggagaccacagcctttgtgggtccgagtggagccggtaaaagcacggct
attcagctcatccagcgcttctacgaccctaaagagggcatggtgaccctggacgggcat
gacatcagagggctgaacatccaatggctgcgctcgctgatcggcatcgtggagcaggag
cccgtgctgttcgccactaccatcgcagagaacatacgctacggccggcccgacgtcccc
atggaggacgtcatcggtgctgccaaacaggccaacgcatacaacttcatcatggacctg
ccacagaaatttgacaccttggtcgggtcgggtggaggtcagatgagcggcggtcagaag
cagcgtattgccatcgctcgagctctggtcaggaagcctcggatcctgctgctggacatg
gcaacctctgccctcgacaacgagagcgaggctacagttcaagaagctttggataaagta
cgtacgggtcgcaccaccatctccatcgctcaccggctgtccaccataaagaacgctgat
gtgatcgtgggctttgagcacggccgggctgtggagagtggcaaacacaacgagctgctg
gagaggaagggggtctacttcactctggtcaccctgcagagccaaggggacaaggctctg
aatgagaaggctcgacaaatggtcgaggatgaagtaccagagaagctgaatctgtccaga
gcaggcagctaccgggccagcttgagagcctctatccgccagcgttctcgatctcagctg
tccaatctgatcccagagtcttctgtttcaatcgctggagagcttggccccagagcctac
gctgtgtcacagccagacaaatccaaggaggacatcgcagaagaggaggaggaatttgtg
gagcctgctcctgttgccaggatcctgaagtacaacgcacccgagtggccttatatgctt
tttggatcctttggggctgccataaacggaggagtgaacccggtgtacgctctcctgttc
agtcaaatcctggcgacattctccctgacggatcctgtggctcagaggaaggagatcgat
ggtatctgtgtgttctttgtcatggtcggcgtggtctctttcttcacccagatgctgcag
gcctatgctttctccaagtctggagagctgctgacccgcaggctacgtcgcctgggcttc
cacgccatgctgggccaagaggtgggctggtttgatgatcacaagaacagccccggagct
ctgaccacgcgcctggccactgatgcctcacaagttcaagcagccacaggctcgcagatc
ggcatgatcgtgaactctctgacaaacatcggcgtggccatcctcatgtccttctacttc
agctggaagctcacgatgctcatcctgtgcttcctgcccttcatcgccctgtcaggggca
ttccaggctaggatgctaacggtgttcgccaagcaggacaagcaggcgatggaggtcgcc
ggacagatttccggcgaggcattgaacaacatccgcaccatcgccggcctggggaaagag
aggacttttgtggagctgtacgcggcgcagctccacgctccgtacgaagcggccctgaag
aaagccaaggtgtacggagcctgctacggcttctcacagtgcgtcgtgttcctgaccaac
tccgcctcctacaggttcggaggttacttggtgcgacaggaggggctccatttcagcttg
gtgttcagggtcatctcagccatcgtcaccagtggcacagctctgggccgagcctcgtct
tacacaccagactacgccaaggccaagatctcagcggctcgtttcttccagctgctggac
cgcgtgcctcagatcagcgtctacagcgataagggagataaatgggataacttccagggg
aacattgagttcattgactgtaagttcacctaccccaccaggccagatatccaggtcctg
aatgggctgaatgtgtcggtgaagccgggccagacgctggccttcgtgggcagcagcggc
tgtgggaagagcaccagcgtccagctgctggagaggttctacgacccggaccacgggcga
gtgctgatagatggccatgactcgacgggtgtcagcgtgcccttcctgcgctctaagatt
ggcatcgtgtcccaggagcccatcctgttcgactgcagcatcgaagagaacatcaagtac
ggcgacaactcgcgggaaatcagcatgaacgaggtcatctctgcctccaagaaagcccag
ctccacagcttcgtcatggcgcttcctgagaaataccagacgaacgtcggagcccaggga
tctcagctgtctcgcggtcagaagcagcgcatcgccatcgcccgggcgatcatacgtgac
ccgaagatcctgctgctggacgaggccacatctgccctggatacggagagcgagaggaca
gtgcaagaggcgctggacaaagccagagaaggtcggacctgcatcgtcatcgcacatcgc
ctctccaccatccagaactctgacatcatcgccgtcatgtcccggggctacgtgatcgag
aagggggcgcacgacgagctcatggccctgaagggagcctactacaagctggttaccacg
ggagcaccaatcagctaa
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integrated database retrieval system
