Trematomus bernacchii (emerald rockcod): 117498889
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Entry
117498889 CDS
T09643
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117498889 (sox1b)
Transcription factors [BR:
tben03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117498889 (sox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117498889
NCBI-ProteinID:
XP_034006940
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MYSIMMETDLHSPMVPQTNPSNPGVGGGKVPQDRIKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LAGGLLGSHPGIGMVGGGQRLDSPGGGGHGGGNAGYASHVNGWANGAYSGQVAAAAAAAH
AMMQEAQLYTQHPGSGAHHHAHHHPHHHHPHNPHRYDMSALSYSPISNSQSYMSASPPGY
GGITGYSHQSSGVSPVPLGSLVKSEPSVSPPVSTARPPQQCPTGDLRDMISMYLPTGEAA
GDSSVHSRLHVLHPQHYQSSGSTPVNGTVPLTHI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggagacggacttacattcccccatggtcccgcagaccaaccca
tccaacccgggggtaggaggaggaaaagtcccgcaggacagaatcaagagacccatgaac
gccttcatggtgtggtcccggggtcagaggaggaaaatggcccaggagaacccaaaaatg
cacaactccgagatcagtaagagactcggcgcggagtggaaagtgatgaccgaggcggag
aagaggccgtttattgacgaggcgaagcggctccgggccatgcacatgaaggaacacccg
gactacaagtaccggccgcggaggaagaccaagacgctgctgaagaaggacaagtactct
ctggccggggggctcctcggatctcacccggggattggcatggtgggcggcgggcagcgg
ctggatagccccggaggagggggtcacggaggtgggaatgccggctacgcgtcgcatgtg
aacggctgggcgaacggtgcgtactcgggccaggtggcggctgcagcggcggcggcgcac
gccatgatgcaggaggcgcagctgtacacacaacacccgggctccggagctcaccatcac
gcacaccatcacccgcaccaccatcacccgcacaacccgcaccggtacgacatgagcgcc
ttgtcctacagccccatctcaaactctcagagctacatgagcgcctccccaccgggatac
ggagggatcaccggatactcgcaccagagctccggtgtgtccccggtgcctctgggttcc
ctggtgaaatctgagcccagtgtgagccctccggtgtccacggcgcgcccaccgcagcag
tgccccaccggggacctgcgggacatgatcagcatgtacctgcccaccggagaggcggcg
ggggactcctccgttcacagcagactgcacgtgctccacccgcagcactaccagagcagc
ggctccactccggtaaacgggacagttcctctgactcatatttaa
DBGET
integrated database retrieval system
