Trematomus bernacchii (emerald rockcod): 117498909
Help
Entry
117498909 CDS
T09643
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04136
Autophagy - other
tben04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117498909 (atg13)
04136 Autophagy - other
117498909 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117498909 (atg13)
03029 Mitochondrial biogenesis [BR:
tben03029
]
117498909 (atg13)
Membrane trafficking [BR:
tben04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117498909 (atg13)
Atg1 complex
117498909 (atg13)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117498909 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
117498909
NCBI-ProteinID:
XP_034006968
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MESGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSNRQFEKSAPIVGIIVDHFVDPPGIGHRNANMGHPCNYRALDDE
DGGYVGVQDSQEVCTTSFSTSPPSQLYASRFSYHPPAGAAELCPPAASQALHAGKEHGGV
VLAPAQPLHGADAHLTVEQAANTPGGSGDDDGLTHSGERRRDEGRRSVSPSDPVESLNAF
TRKIGAFVNKPITQLTAASLDLPFAAFAPRGLDSEENDPMVQPPDSPPCPSPLQASLHSQ
GSEGSGQQDDFVMVDFRPAFSKDDLLPMDLGTFYREFQNPPQLASLSLHISAQSMADDLD
SLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggcctgagtccccaggataaaaaagacttggacaagttcattaagttcttt
gccttaaagactgtccaggtgattgtccaagcgcgtcttggagagaagatatgcactcgc
tcgtcctcatcgcctactggctctgattggtttaatttggccatcaaagacatcccagag
gtgactcatgaagctaaaaaggcgctggctggacaactcccaggcatcgggcgctccatg
tgcgtcgagatctccctgaagacgtcagagggggactcaatggagttggagacatggtgt
ctggagatgaatgagaagtgtgataaggacatcaaggtgtcgtacacagtctacaaccgt
ctgtctgtccttctgaagtctctgctggccatcaccagagtaacacctgcctacaaactg
tccagaaagcagggacacgactatgtgatattatacaggatttacttcggggaagtccag
ctgagtggattaggagaagggtttcagacggtgcgtgtcggtgttgttggcacacctgtt
ggcacggttacactgtcatgtgcttaccgcaccaacctggcattcatgtccaacagacag
tttgagaagtctgctcccatcgtggggatcatcgtggatcactttgtggatccacctggc
atcggccaccgtaatgcaaacatgggacatccctgcaactacagagctctagatgatgag
gacggaggatatgtaggagttcaggattcccaggaggtctgcaccacctccttctccacc
tcccctccctcacagctgtatgcttccaggttttcatatcaccctccagctggagccgct
gagctgtgtccccctgctgcaagccaggcgttgcatgctgggaaggagcacggaggagtt
gtattggctcctgctcaacctcttcatggagctgatgctcatctcacagtagaacaagct
gccaacactcctggtggcagtggtgatgacgatggcctgacgcacagtggagaaagaagg
agggatgaagggcggaggagcgtctctccctccgaccccgtggagtcgctcaacgccttc
accaggaaaattggagcctttgtcaataaacccatcacacagttaacagcagccagtctg
gacctgccatttgctgcatttgctcctcgaggcctggactcagaggagaatgatcccatg
gtgcagcctccagactcgcccccctgcccctcccctctgcaggccagcctccactctcag
ggctcggagggatcggggcagcaggacgacttcgtcatggtcgactttcgtccagccttc
tctaaagacgacctgctgccgatggatctgggcactttctacagagagtttcaaaaccct
ccgcaactggccagcctctctcttcacatcagcgcccagtcgatggccgatgacctggac
tcactgccagagaaacttgccgtctacgagaaaaacatcgacgaatttgacgcttttgtg
gacatgctccaataa
DBGET
integrated database retrieval system
