Trematomus bernacchii (emerald rockcod): 117498926
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Entry
117498926 CDS
T09643
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117498926 (gtf3c3)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
117498926 (gtf3c3)
TFIIIC, fungi type
117498926 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_11
TPR_9
TPR_12
ANAPC3
TPR_20
HAT_PRP39_C
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
117498926
NCBI-ProteinID:
XP_034007012
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MSGFSAELIDYLEGRISFEEFDKRRDERKAKESEVPAGVEEDAQPSTSSIIPGKIEEGVS
PGVQLAFASMLEEKPEPASSEEPEEEEEEEEEEDSLSYVDDEEDQDYKVEKDEGGKMEMD
IEEAAEVEEAEKGPGVTIERKRKGRKKKKKREMDEDEDVTVGDVFALEMELNRENKKMMK
ERRHRSKLPRALRGLMGEANIRYARGEKEDAILMCMEIIRQAPLAYEPFSTLAMIYEDEE
DMEKALQFGLITAHLNPSDCEEWVRLAEMSLEQDNIRQAIVCYSKAIKYDPTNVRYVWER
SSLHMRLGEHKQCMDGYRRILSLLPMEDGEHFMQLSKDMAKSYYESNDLPSALGVIEEAL
ARHPDLVSDDFINMAAELFISNRQYNKALQVLVQFAAIVLVRDESNPDVVEPREEEKEAE
KMTEEEANTNEECTTTVKTVEEIAAEENGEIRDVQVPDSVPVDLRAKLMVCLIHLHVITP
LEGLVSSLMEQSQEEIGDLYLDVAEAYLEEGEYMAALPLLSALVISEKYNLAVVWLRHAE
CLKALGHMEVAAQSYTKVVDMAPQHLEARLSLATLQQQLGRPDCALKALESMYDSDTLAQ
DSSAAQKELKLLLHRSTLLKTQGLTQDYLDAMITMISMLLKVSMQRAKVCVRSVTLSGES
HLRLVKSKDMVPEIDDHEAAYLDNTGKTNVLSREDWWQLLVSCVQTMSEVKRYEESELLV
ESAMEFYSFYDNKPRRKELEFFGLSATILDHNYYKAYNYIRLMLMENRDQPQLWNIFNQL
TITSQHQRHHRFCLRLLLKHPDNHALCFLCGHNAMVSGSFKHALGQYVQAFQTHPDTPLH
SLCVGLTFFHMASQKYVAKRHALVLQGFSFLWRYVELRGVCQESMYNLGRALHQMGLAYL
AIHYYQKALKLPAQKLEGIPDDQVDLSREIAFNLSLIYQASGNMNMAHQIIKTHCVV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggttcagcgcggagctcattgactacctggaggggaggataagttttgaggag
ttcgacaagcggagagatgagcggaaagcaaaggagtcggaggtacctgcaggtgtcgag
gaggatgctcagccctccacctcctccattatcccgggaaagatagaggagggggtcagc
ccgggggtccagctggccttcgcctccatgctggaagaaaagccagaaccagcatcttca
gaagagccggaggaggaggaagaggaggaggaggaggaggacagcctgagctacgtggat
gatgaagaagatcaggattacaaggtggagaaagatgaggggggcaagatggagatggac
atagaggaggcggcagaggtagaggaggcagagaaggggccaggggtgacaatagaaaga
aaacgaaaaggcaggaagaagaagaagaagagagagatggatgaggacgaagacgtgacg
gtgggggatgtgtttgccctggagatggagctgaaccgagaaaacaagaagatgatgaag
gagcggcgtcatcgcagcaagctgcccagagctctgagaggcctgatgggagaggccaac
atccgctacgcccgaggagagaaagaggacgccatcctgatgtgcatggagatcatacga
caggctcctctggcctatgagcccttctccaccttggccatgatctacgaggatgaggag
gacatggagaaggcgctgcagttcggtctgatcacggcccatctcaacccctcagactgc
gaggagtgggtcagactggccgaaatgtctctggagcaggacaacatccgacaggccatc
gtctgctactcgaaggctattaaatatgaccccaccaacgtacgctacgtgtgggagcgc
tccagcctgcacatgcgcctgggcgaacacaaacagtgcatggacggataccgcaggatc
ctgtccctgctgcccatggaggacggggagcacttcatgcagctctccaaggacatggcc
aagagctactatgagagtaatgacttgccctcagctctgggggtaattgaggaagctctt
gcgcgacaccccgacctggtcagcgatgacttcatcaacatggccgccgagctcttcatt
tccaaccggcagtacaacaaggccctgcaggtgctggtccagtttgcagctatagttttg
gtcagggatgaatccaacccagatgttgtagaaccaagggaagaagagaaggaggcagag
aagatgactgaggaagaagcaaatacgaatgaagaatgtacaacaactgtgaagactgta
gaggaaatagctgcagaagagaacggtgaaattcgggatgtccaagtaccagacagtgtc
ccagtggacctgagggccaagctaatggtttgcctcattcacctgcatgtcatcacaccc
ctggagggcctggtgtcgtcgctgatggagcagagtcaggaggagatcggggacttgtac
ctggatgtagctgaagcctacctggaggagggcgagtacatggctgctctgcctctgctg
tccgccctcgtcatctccgagaagtacaacctggccgtcgtctggctccgacacgcagag
tgtctgaaggcgctgggccacatggaggtggcggcacagagctacactaaagtggtggat
atggccccccagcacctggaggcgcggctctccctggccaccctgcagcagcagctgggc
cgacccgactgcgccctcaaagctctggagtccatgtacgacagtgacactctggcacag
gactcttcagccgcacagaaggaattgaagctgcttctccatcgctccaccctgctgaag
acccagggactcacacaggactacctggatgctatgatcactatgatctccatgctgctg
aaggtgtccatgcagcgagctaaggtgtgtgtgcgttctgtcaccttgtcgggggagagt
cacctgagactggtgaagtctaaagacatggtgccagagattgatgatcatgaggctgca
tatctggacaacacaggtaagaccaacgtcctgtccagagaggactggtggcagctgctg
gtgagctgcgtgcagacgatgagcgaggtgaagcgctacgaggagtctgagctgctggtg
gagtctgccatggagttctactccttctacgacaacaagccgcggaggaaggagctggag
ttcttcggcctgtccgccaccatcctcgaccacaactactacaaagcatacaactacatc
agattgatgttgatggaaaatcgggatcagcctcagctttggaatattttcaaccagctg
actatcacctcccaacaccagcgtcaccatcgcttctgtctgcgcctcctgctgaagcat
cctgacaaccacgccctgtgtttcctgtgcggtcacaacgccatggtctccggaagcttc
aaacatgccctaggccagtatgtccaggccttccagactcaccccgacacccccctccac
agcctgtgtgtgggcctcaccttcttccacatggcctctcagaaatatgtggccaaacgc
catgcgctggtgctacagggtttctccttcctgtggcggtatgtggagctgcggggagtg
tgtcaggagagcatgtacaacctgggcagagcgctgcatcagatgggcctcgcatatctg
gctatacattattatcaaaaggcactgaaactgcctgctcagaaactagagggtatccct
gacgatcaggtggatctgagcagagagatcgccttcaacctgtctctcatctaccaggcc
agcgggaacatgaacatggcccaccagatcatcaaaacacactgcgttgtctga
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