Trematomus bernacchii (emerald rockcod): 117498956
Help
Entry
117498956 CDS
T09643
Symbol
obsl1a
Name
(RefSeq) obscurin-like protein 1a
KO
K19574
obscurin-like protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117498956 (obsl1a)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
117498956 (obsl1a)
BRITE hierarchy
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Izumo-Ig
Ig_6
Ig_4
Ig_5
C2-set_2
C1-set
Receptor_2B4
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
117498956
NCBI-ProteinID:
XP_034007059
LinkDB
All DBs
Position
Unknown
AA seq
2188 aa
AA seq
DB search
MDIFGGAPRVLGCPRPVLAQCGTDATLRCQIGGDPRPDVIWERKNIQIMSEGRYKLSEEG
KAYSLTITGVTLQDAGQYICKAINSVGETCAAASLKVEGEAQQVNGVQQPMKENGEFGGH
QNGYCTVNNGEHRKQQEEVDLTSDDKPRFLIKPLSLRVDRGEDAAFSCKIWGTPLPEVTW
EKDGKKLNDIFESAHYNISNQDGNWFQLKIYRTRMPDKGVYTCRAVNCNGEALVGAVLLV
EPVPEREESKMSSNGQTNSQWSPKQRSGRLSLSRVIEEPPVRASKAKKFAVAEGKHAKFR
CFVTGKPKPEIIWKKDGIPLLPGRRHLIFEDREGYYTLKVLYCKVQDTGLYVCAASNALG
NTLSAVHLSVKGPAVRFRRPLRDVEVQERDVAVLECEVPDESLPSAWYLEDQRLMPSNKY
GMEQKGTTRRLTIQDVGTDDDGVYLCEMPDGGKSIAELSVKGSIVRKLPRKLEVLEGENA
VFCVEVEHNDMEILWFKDGLMLHETQQTILKSFGKTHILVFVNVAYQDTGVVTFVSGRSK
TSSRLKVKATRHLPPICPVEAKMNSDGLNGALLTWVTAPNSQTSTRSIFVVERQEVGSQE
WHKCFTSESATSADITSDSVPCEGDYRFRLCCINKYGRSGHVEFPKVVHIVPGPKICSRL
KGCEVLEGEEAKFSIELSAPMVGTWFLNSAQLQHGGRFSLQQSQTRHSLVICETRTAEDS
AEVTFIANGVRDSAVLKVIPAVIKFSPQSNVDSNKRVETGDAIVLYCEVSHPFAKVCWFK
DGQELQVTDGLNIQSDGNMRRIVIQSADASRSGVYTCETSGDVITFNVAVAGPSVEFSPI
PEEELHKSSMELDPVVLLCNVSQDDAEVVWYKDGCEIQPTENITLQAEGTMRRLIIRSAE
TSDAGSYTCQTGNNSMDFTVNVREPPVMIVDPKDDIVMESYISEEVNLQCELSRSSGRVR
WYKDGQEMDESDNVKLISEGPYRRLTILNGSVDDGGEYVCETDGDSVFFQLNVKEPLVRI
ISPSEPEVELTHSASERMELSCEISQADAPVRWYKDSMEVEESPNLILEVDGAHRRLVIP
FTSVDDAGEYICDTEDDSVAFLVTIDKPPVTLTRPENTPEKLESFAGKPIVLEIVVSRPG
AEVKWWLNGREVEESSNIAITEEGLIHRLTIHSATPEDSGKYTCDAADDKIDFEVKVSEP
PVKILRKSEIKTNLKSLISDDIVLECELSRANAVGKWYKDNCRVEDDERFCQEEEGAFRS
LVILAAELGDSGEYFLDVGDDNISYHVIVEEPPVTIIGNSNDPDNQEMVAGDELILACEV
SRANAPVQWFCNEKLLTSDSRTYIESYGTLRKIIISNVQPSDSGKYVCDAGDDKMISVVK
IQEPPVTFVNKEDDIVVTGYEAESVTLESYVSKENAMVRWMKDWTPVEGERTQALVEGHK
RTLTINPLRRSDAGEYTCDVNTDQIRFGLLVKEMRIKFVMPLRDTVAHADGMVTLRCEVC
KPKADVQWLRNGEEVVPGRRFTIRADGVERSLTIHRLIKEDAGEYACESKDDRSVAMLRV
EMPRVVEFLTELHNTTVLEGEDATFKCVVSPEDIQLVWLLDNEPITLGDRFQANQNGLCH
TLVIKKCQILDCSKITAEAEGQMSKASLKVQEAQVMFIKKMEAVMAEEFGDATLETEISL
ETGEVQWMRQGVVIQPGPRHTLAQNGCKRSLSIQNLNLSDRGTYRCETLHDRTQVKLNVE
PRNITIRKGLTDQETLERETASFEVELSHTDVEGIWQKDGIRVKANNQWRVSTNGLVHSL
TLSNLTLEDTGTIVFTAEGARTSARLTIKEPPVSFLKLLTDVSVEEELPVTLECEFSRQN
IEVKWLKDGKELKAGTNCRIYSMGRKRFCQIMQCTRADSGTYTCDTGEINTSCSLEVNEH
KLEIVHNLEDLYIQEDQNAVFMCEVSLEEVTGEWFKEGHKIRPTSTIKIRTEGSKHFLLM
CNVKAEDAGEVRFVAKDVESTAYLEVEELPVSIVKPLRDRTALEKHRVILECTVSTPRSS
ATWYKGSEELVSSDRIEILSDDCSHKLVIQEVSVEDEGSYTIEVGEHTSKAKLMVEAQAL
VMVKELEDDEVTEPEAASFQCEVSVDINKAPLWTLNGETLQTGPSVRLESHGTVHKLTLK
NTSVDMSGVVKFTLGKAKSSATLTVKEK
NT seq
6567 nt
NT seq
+upstream
nt +downstream
nt
atggatattttcggaggtgctcctcgagttctgggctgcccacgccctgtgctggcacag
tgtggcacagacgcaaccctgaggtgccaaattggtggtgaccctcgtcctgatgtgatc
tgggagcgtaaaaacatccagatcatgtctgagggacgctacaagctttctgaggagggg
aaggcttactcactaaccattactggagtaactctgcaggatgctggccagtatatttgc
aaggccataaatagcgtaggtgaaacatgtgcagcagcctctctaaaagtggagggagag
gcccagcaggtcaatggtgtgcagcaaccaatgaaagaaaatggagaatttggaggacat
cagaatggatactgcacggtgaataatggtgaacacaggaaacaacaagaggaggttgat
ttaacgtctgacgataaaccacgattcctcatcaagcccctctctttgcgcgtggaccgc
ggagaagatgccgccttctcctgcaaaatctggggcacgccactgcctgaggtgacgtgg
gagaaagacgggaagaaactgaatgatatattcgagagtgcacactataatataagcaat
caagatggcaactggttccagctcaagatctacaggacgcgcatgccggacaaaggagtc
tacacctgcagggccgtcaactgcaatggcgaggccttggtcggtgccgtccttcttgtt
gagcccgtaccggagcgagaggagagtaaaatgtcctcgaacggtcaaactaacagccag
tggtcgccgaagcaaagaagcgggaggctcagtctgtcgagggtcatagaggagccacct
gtcagggcgtctaaagccaagaagtttgccgtggcagagggtaaacacgccaagttccgc
tgcttcgtgacagggaagccaaagccggagatcatttggaagaaagatgggattccacta
ctacccgggaggcgccatctgatatttgaggacagagagggttactacacgctgaaggtt
ctgtactgcaaagtgcaagatacaggactgtatgtgtgtgcagcttcaaacgcgcttgga
aacaccctcagcgctgttcacctgtcagtcaaaggcccggctgtgcggttcaggcgtcca
ttaagagacgtggaggtacaggagagggatgttgccgtgctggagtgtgaggtacctgat
gagtcgctcccctctgcctggtacctggaggaccagcggctgatgcccagcaataaatac
gggatggagcagaaaggaaccacacgaagactgaccatccaggatgttgggacggacgac
gatggagtttacctttgtgagatgccggatggagggaagagcatcgcagagctatcagtt
aaaggttctattgttcgtaaacttccccggaagctggaggtcctggagggggagaacgct
gtgttctgcgtggaggtggagcacaatgatatggagatcctctggttcaaagacggcttg
atgcttcacgagactcagcagaccatcctgaagtcatttggcaaaacgcacattctggtc
tttgtcaacgtggcctatcaagacacaggggtagttacttttgtctcaggaagatccaag
acttcatcacgtctcaaagtcaaagcaacaagacatcttcctcctatctgccctgtggaa
gccaaaatgaattcggatggactcaacggcgctcttctcacctgggttactgctcccaac
agccagacctccacccgatccatttttgtcgtggagagacaggaagtgggctcccaagag
tggcataagtgtttcacctcagagagcgccacttcagcggatatcaccagcgacagcgtt
ccgtgcgagggcgactaccggttccggctctgttgcatcaacaagtacgggcgaagcggc
catgtggagtttcccaaagttgtccatatagttcctgggccaaagatctgcagcaggctc
aaaggttgtgaggttctggaaggagaagaagctaagttctccatcgaattgtctgcacca
atggttggaacttggtttttgaacagcgctcaactgcagcatggcggacggttttcatta
caacagtcccaaacacggcactcattggtaatctgtgaaactcgcaccgcagaagactcg
gcagaggtcacgttcatagccaatggagtccgggattcagctgtgctcaaagttatacct
gctgtgatcaaattcagtccacagtcaaacgtggacagcaataagagggtggaaactggt
gacgccattgtactctactgtgaagtctcccaccctttcgcaaaagtctgctggtttaaa
gatggccaggagctccaagtgacagacggccttaacatccaatcagatgggaacatgagg
aggattgtgattcaatcggctgatgcgtcccgctctggagtttatacatgtgaaacttcc
ggagatgtcattacattcaatgttgccgttgcaggtccttctgtggagttcagtccgatc
ccagaagaggagcttcataagagcagcatggagctggaccccgtagtgctgctatgcaat
gtctcccaagatgatgccgaagtcgtgtggtataaggatggctgtgagatccagcccact
gaaaacatcactctgcaggcagagggaaccatgaggaggctgatcatccgctctgcagaa
acttcagacgctggcagctacacctgccagacaggaaacaatagcatggactttaccgtc
aatgttagagagcctccagtgatgattgtggatcctaaggatgatattgtgatggagagc
tacatctcagaggaggtcaacctgcagtgcgagttgtctcgctccagtgggagggtgcgc
tggtataaggatggccaggagatggatgaaagtgacaatgtaaagctgatatctgaaggt
ccttacaggaggctcaccatcctcaacggctcagtggacgatggcggagagtatgtttgt
gaaacagatggagactctgtctttttccaacttaatgtcaaggagcccctggtaagaatc
atttccccaagtgaaccagaggtggaactgacacattcggcatccgagaggatggagctc
agctgtgagatctctcaggcggatgccccggtccgctggtacaaagacagcatggaggta
gaggagagtcctaacctgatcctggaggtggatggggcccatcgccggcttgttataccc
tttacatctgtggatgacgcaggggagtacatttgtgacactgaagatgactctgtggcc
ttcctggtcactattgacaagcccccagtaactcttactcgtccagaaaacacgccggag
aaactggagagttttgctggcaaaccaatcgtcctggagatcgtagtgtcccggccaggt
gccgaagtgaagtggtggctaaatggcagagaagtagaggagagcagtaacattgcaatc
actgaggaagggctcatccatcgtctgacgatccactctgccaccccagaggattctggg
aaatacacctgtgacgctgctgatgataaaatagattttgaggttaaagtttcagagcca
ccagtgaagatcctaagaaagtcagagattaagacaaatctgaaatctctgatttctgat
gacattgtgctggagtgtgagctctccagagccaatgctgtcggcaaatggtacaaggac
aactgtcgtgttgaggacgatgaaaggttctgccaagaggaagaaggggctttccgctca
ttggtcatcctcgctgctgaacttggagactcaggagagtacttcctggatgtcggagat
gacaatatcagctaccatgttatagtagaagagcctccagtgacaatcattggcaactca
aatgaccctgacaaccaggagatggtagcaggcgatgaactgatcctggcctgtgaagtg
tcccgtgccaacgcccccgtccagtggttctgtaatgagaagttgctaaccagtgactcc
cggacctacattgagagctatggcactctgaggaaaattatcatttcaaatgttcaaccc
tcagactctgggaaatacgtgtgtgatgctggggacgataagatgatcagcgttgtcaag
attcaagaacctccagttacgtttgtgaacaaggaggatgacattgtagtgacaggttac
gaagcagagagcgtgactttggaaagctacgtttccaaggaaaacgccatggtacgttgg
atgaaagactggacgcctgttgaaggtgaacgtacccaagctctcgtggagggccataag
cgcacccttacaatcaatcctttgagacgctctgatgctggcgagtacacgtgtgacgtt
aacacagaccagatccgcttcggcctgctggtgaaagaaatgaggataaagtttgtgatg
ccactacgagacactgtggcccatgcagacggtatggtgacccttcgctgtgaggtgtgc
aagccaaaagcagatgtccagtggctgaggaatggagaggaggtggttccaggcagaagg
ttcactattcgggcggatggagttgagagaagcctgaccatccaccgtttaatcaaagag
gatgccggagagtatgcctgtgagtccaaagacgaccggagcgtggcaatgctgagagtt
gagatgccaagagtagtggagttcctcacagagctccacaacaccactgtgctagaagga
gaagatgctacgttcaagtgtgtggtgtcccctgaggatatccagctggtctggctctta
gacaatgagccaatcacgctgggtgatcgtttccaggcaaaccagaacggcctgtgccac
accttggtcatcaagaagtgccagattttggactgttctaagattacagcagaggcggag
ggacaaatgagcaaagccagcctcaaagttcaggaggctcaggtcatgtttataaagaaa
atggaagctgtcatggcggaagagtttggagacgccaccttggagacagagatcagcctg
gagacgggagaggttcagtggatgaggcaaggagtggtcatccagcctggtccccgacac
acgctggcccagaacggctgtaaacgcagtctcagcatccaaaacctgaacctgtcagac
aggggaacctaccgctgcgagactctgcatgaccggacgcaggtcaagctcaatgtagaa
ccgcgtaacatcactatccgtaagggcctgactgaccaagaaaccttagaacgagagact
gcttcctttgaggtggagctatcccacacagatgtggagggaatctggcagaaggatggc
atcagggtgaaagcgaacaaccagtggagggtgagcaccaatggcctggtccatagcctc
accctgtccaacctcaccctggaggacacgggcactattgtcttcacagctgaaggggcg
cgcaccagcgctaggctcaccatcaaagagcctccggtgtctttcctgaaattgctaact
gatgtcagtgtggaggaggaattgccagtcactctggagtgtgaattctccagacaaaac
atcgaagtcaaatggcttaaggacgggaaggagctgaaggcggggacaaactgtcggatc
tactccatgggccggaagcggttctgtcagatcatgcagtgcacccgggctgactctgga
acatacacatgtgacacgggggaaatcaacacttcctgttcactggaggttaatgagcat
aagttggagatagtgcacaatctggaggacctttacattcaggaggaccagaatgctgtc
ttcatgtgtgaggtttctctggaggaggtcactggggagtggttcaaagaaggccacaag
atccggcccacaagcaccatcaagatccgcactgaaggatccaaacacttccttctgatg
tgtaacgtcaaagctgaagatgctggggaagtccgctttgtagccaaggatgttgaatct
acagcttacctcgaagtagaagaactccctgtttctattgtaaaacccctgcgagatcga
acggccctggagaaacaccgcgtgatccttgaatgcaccgtttccacgccacgctccagc
gcaacctggtacaagggcagtgaggagctggtttcctctgatcgaattgagatcctgtct
gacgactgctcacacaaactggtgatccaggaggtgtctgtggaggatgagggcagctac
accatcgaggtcggggagcacacatccaaagccaaactgatggtggaagcccaagccctt
gtaatggtgaaagagctggaggatgatgaggtaaccgagcctgaggccgcatctttccag
tgtgaggtgtctgtagacataaacaaggctcctctgtggactttaaatggagagactctt
cagacgggcccctctgtccgcctggaaagccacgggacggtccacaaactcaccttgaaa
aacaccagtgtggacatgagtggggtggtcaagtttaccttgggcaaggccaagagcagt
gccacactcactgtaaaggaaaagtag
DBGET
integrated database retrieval system
