Trematomus bernacchii (emerald rockcod): 117499027
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Entry
117499027 CDS
T09643
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117499027
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117499027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
117499027
NCBI-ProteinID:
XP_034007149
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MDGISDVAVGVKRGSDELSLYSSSNSALSSITDGSNGSDSKKLRVEEAPPSRVLHIRKLP
NEASETEVIALGLPFGKVTNILTLKGKNQAFLEMGTEETAVTMVNYYTTVTPHIRNVPVF
IQYSNHKELKTDSGNQRTQAVLQAVSAVQSGGSPSSDVQEALAAASSPVLRIIIDNMFYP
VTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQAKLALDGQNIYNSCCTLR
IDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPNLESSVNAFNKDSGSLLGKIPGALNPL
SAAAAAAAAAGRVALSGQNGSSGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKK
DSALIQMSDGNQAQLAMSHLNGQKMNGKIIRVTLSKHQTVALPRDGLDDQGLTKDFNNSP
LHRFKKPGSKNFQNIFPPSATLHLSNVPQDVTEEDLRLLFSNAGGTVKAFKFFQDRKMAL
IQMSTVEEAIQALIDLHNYNMGGSQHLRVSFSKSTI
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagtgacgttgcagttggagtgaagagaggatcagacgagctgagtctg
tacagcagctccaactcggccctgagcagcatcactgacggctctaatggcagtgacagt
aagaagctgagagtggaagaggcccccccctccagagtgctccacatcaggaagcttccc
aacgaggcgtcggagacggaggtcatcgcgctcggcctgccgttcggaaaggtcacgaac
atcctgaccctgaagggcaagaaccaggcgttcctggagatggggacggaggagacggcc
gtcaccatggtcaactactacaccacggtcactcctcacatccgcaacgtgcccgtcttc
atccagtactccaaccacaaagagctgaagacagacagcggcaaccagaggacgcaggcg
gtgctgcaggcggtgtcagctgtgcagtcgggggggtctcccagctctgatgtccaggag
gctctggctgctgcctccagccccgtgctgaggatcatcatcgacaacatgttctacccc
gtaacactggacgtactgcagcagattttctccaagttcggcacggtgatgaagataatc
acgttcacaaagaacaatcagttccaggctctgctccagttcagcgagccagtcaacgcc
cagcaggccaaactggcgctggatgggcagaacatctacaactcgtgctgcacgctgcgc
atcgacttctccaagctggtgaacctgaacgtgaagtacaacaacgataagagccgagac
tacacccgaccagagctgccagctggagacgggcagccgaacctcgaatcctccgtcaac
gccttcaacaaggactccggctcgctgctcgggaagatcccaggagctctgaaccctctc
agtgcagcagcagcagcggcggctgcagccgggcgggtcgctctgtccggacagaacggg
tccagtggggtgctgctggtcagcaacctcaacgaggagatggttacgccccaaagtctg
tttaccctcttcggagtgtatggtgatgtgcagagggtgaagatcctctacaacaagaag
gacagcgctctgatccagatgtccgacgggaaccaggcgcagctcgccatgagccacctg
aacgggcagaagatgaacgggaagatcatccgcgtgacgctctctaagcaccagacggtg
gcgctgcctcgcgacgggctggacgaccagggcctcaccaaggacttcaacaactccccc
ctgcaccgcttcaagaagcccgggtccaagaacttccagaacatcttccccccctcggcc
acgctgcacctctccaacgtgccccaggacgtgacggaggaggacctgcggctcctcttc
tccaacgccggaggaaccgtcaaggctttcaagtttttccaggaccgtaagatggctctg
atccagatgtccacggtggaggaggccattcaggctctgatcgaccttcacaactacaac
atggggggcagccagcacctcagggtgtccttctccaagtccaccatctga
DBGET
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