Trematomus bernacchii (emerald rockcod): 117499038
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Entry
117499038 CDS
T09643
Name
(RefSeq) tubulin alpha-1C chain isoform X1
KO
K07374
tubulin alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04210
Apoptosis
tben04530
Tight junction
tben04540
Gap junction
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117499038
09143 Cell growth and death
04210 Apoptosis
117499038
09144 Cellular community - eukaryotes
04530 Tight junction
117499038
04540 Gap junction
117499038
09142 Cell motility
04814 Motor proteins
117499038
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117499038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117499038
03036 Chromosome and associated proteins [BR:
tben03036
]
117499038
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117499038
04147 Exosome [BR:
tben04147
]
117499038
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117499038
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117499038
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117499038
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117499038
Exosomal proteins of other body fluids (saliva and urine)
117499038
Exosomal proteins of colorectal cancer cells
117499038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117499038
NCBI-ProteinID:
XP_034007164
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MRECISVHIGQAGAQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSINT
ASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA
NQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQP
PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS
EAREDMAALEKDYEEVGTDSVGEEDEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgcatctccgtccacattggccaagctggagctcagataggcaatgcatgc
tgggagctctactgtctggagcacggcatccagccggacggtcagatgccgagcgacaag
accatcggggggggagacgactccttcaacaccttcttcagcgagactggagctggaaaa
cacgttcccagagccgtgtttgtggacctggagcccacagtcatcgatgaagtccgcaca
ggaacctaccggcagctcttccaccctgagcagctgatcactggaaaggaagatgcagcc
aacaactacgcccgcggtcactacaccatcggaaaggagatcatcgacctggttctggac
aggactcgtaaactggccgaccagtgcacagggctccagggtttcctcatcttccactcc
ttcggagggggaaccggctctggcttcacctccctgctgatggagcgtctctccgtcgac
tacgggaagaagtccaagctggagtttgccatctacccggctcctcaagtgtccacggct
gtggtggagccctacaactccatcctcaccacccacaccaccctggagcactctgactgc
gccttcatggtggacaacgaggccatctacgacatctgccgcaggaacctggacatcgag
cggccgacctacaccaacctcaacaggctgatcggacagatcgtctcctccatcaacacc
gcctccctgcgcttcgacggcgccttgaacgtggatctgacggagttccagaccaacctg
gtgccctaccctcgaatccacttccctctggccacctacgccccggttatctccgcagag
aaggcctaccacgagcagctgtctgtcgcagaaatcaccaacgcctgcttcgagcccgcc
aaccagatggtgaaatgtgaccctcgccacggtaaatacatggcctgctgtctcctgtac
cgcggagatgttgttcccaaagatgtgaactcagccatcgccaccatcaaaaccaagcgc
accatccagtttgtggactggtgtcccactggcttcaaggtgggcatcaactaccagccc
cccactgtggttcctggaggagacctggccaaggtgcagagggcggtgtgcatgctgagc
aacaccaccgccatcgcagaggcctgggcgcgcctggaccacaagttcgacctgatgtac
gccaagagggccttcgtgcactggtacgtgggagaggggatggaggagggggagttctcc
gaggccagagaggacatggccgccctggagaaggactacgaggaggtgggcaccgacagc
gtgggggaggaggacgaaggagaggagtactga
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